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Sample GSM73379

Query DataSets for GSM73379

Status

Public on Dec 01, 2005

Title

AML_t(9;11)_LIB6

Sample type

SAGE

Anchor

NlaIII

Tag Count

20712

Tag Length

Source name

bone marrow, CD15+ myeloid progenitor cells

Organism

Homo sapiens

Characteristics

Acute Myeoloid Leukemia (AML) patient sample with chromosomal translocation t(9;11). This library was constructed from a treatment-related AML cells with t(9;11).

Extracted molecule

total RNA

Description

SAGE analysis of gene expression in leukemic myeloid progenitor cells isolated from bone marrow

Submission date

Sep 06, 2005

Last update date

Nov 19, 2008

Contact name

San Ming Wang

E-mail(s)

swang1@northwestern.edu

Phone

224-364-7491

Fax

224-364-5003

Organization name

ENH Research Institute, Northwestern University

Department

Center for Functional Genomics

Street address

1001 University Place

City

Evanston

State/province

ZIP/Postal code

60062

Country

USA

Platform ID

GPL4

Series (1)

GSE3255

Gene Expression Profiles with Common Translocations in Acute Myeloid Leukemia (AML) using SAGE

Data table header descriptions
TAG	Ten-base SAGE tag
COUNT	Absolute tag count
TPM	tags per million

Data table
TAG	COUNT	TPM
ATAATTCTTT	190	9173.43
TCAGATCTTT	168	8111.24
CACCTAATTG	163	7869.83
CAATAAATGT	162	7821.55
TGCACGTTTT	162	7821.55
AAGACAGTGG	154	7435.30
GTGAAACCCC	139	6711.09
AGCTCTCCCT	128	6179.99
GAGGGAGTTT	117	5648.90
CCTGTAATCC	115	5552.34
CCACTGCACT	111	5359.21
ATTCTCCAGT	104	5021.24
CAAGTTCTTT	102	4924.68
TTGGTCCTCT	100	4828.12
TAGGTTGTCT	99	4779.84
GTCACACCAC	97	4683.28
GCCTGTATGA	94	4538.43
CCAAACGTGT	92	4441.87
AAGGAGATGG	90	4345.31
GTGAAACCCT	90	4345.31

Total number of rows: 9453

Table truncated, full table size 176 Kbytes.

Supplementary data files not provided