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Sample GSM73382 Query DataSets for GSM73382
Status Public on Dec 01, 2005
Title AML_t(15;17)_LIB2
Sample type SAGE
Anchor NlaIII
Tag Count 48733
Tag Length 10
 
Source name bone marrow, CD15+ myeloid progenitor cells
Organism Homo sapiens
Characteristics Acute Myeoloid Leukemia (AML) patient sample with chromosomal translocation t(15;17)
Extracted molecule total RNA
 
Description SAGE analysis of gene expression in leukemic myeloid progenitor cells isolated from bone marrow
 
Submission date Sep 06, 2005
Last update date Nov 19, 2008
Contact name San Ming Wang
E-mail(s) swang1@northwestern.edu
Phone 224-364-7491
Fax 224-364-5003
Organization name ENH Research Institute, Northwestern University
Department Center for Functional Genomics
Street address 1001 University Place
City Evanston
State/province IL
ZIP/Postal code 60062
Country USA
 
Platform ID GPL4
Series (1)
GSE3255 Gene Expression Profiles with Common Translocations in Acute Myeloid Leukemia (AML) using SAGE

Data table header descriptions
TAG Ten-base SAGE tag
COUNT Absolute tag count
TPM tags per million

Data table
TAG COUNT TPM
CTAAAGCGGC 3665 75205.71
AAAGCGGCCG 1953 40075.51
TCTAAAGCGG 1645 33755.36
AAGCGGCCGC 741 15205.30
CCACTGCACT 734 15061.66
GTGAAACCCC 568 11655.35
CCTGTAATCC 555 11388.59
CTAAGCGGCC 535 10978.19
CCCATCGTCC 448 9192.95
GTGAAACCCT 256 5253.11
TAGGTTGTCT 227 4658.03
TAAAGCGGCC 213 4370.75
TCTAAGCGGC 204 4186.08
CCATTGCACT 201 4124.52
CACCTAATTG 197 4042.44
GCTCCCCTTT 189 3878.28
CTCATAAGGA 181 3714.12
TTCATACACC 162 3324.24
GGCCACGTAG 161 3303.72
AGGTCAGGAG 155 3180.60

Total number of rows: 19766

Table truncated, full table size 368 Kbytes.




Supplementary data files not provided

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