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Sample GSM740471 Query DataSets for GSM740471
Status Public on Jun 13, 2011
Title Prostate stromal cells (cell culture)
Sample type SRA
 
Source name cell culture
Organism Homo sapiens
Characteristics cell type: prostate stromal cells
Extracted molecule total RNA
Extraction protocol Linker ligation and amplification of prostate RNA samples were performed as described in (Mitchell et al. 2008).
 
Library strategy RNA-Seq
Library source transcriptomic
Library selection size fractionation
Instrument model 454 GS
 
Description prostate primary cell culture stromal sample
Data processing Once linkers were trimmed, reads were combined and counts tallied.
 
Submission date Jun 12, 2011
Last update date Jun 11, 2013
Contact name Muneesh Tewari
E-mail(s) mtewari@fhcrc.org
Organization name Fred Hutchinson Cancer Research Center
Department Human Biology
Lab Tewari
Street address 1100 Fairview Ave, N
City Seattle
State/province WA
ZIP/Postal code 98109
Country USA
 
Platform ID GPL10400
Series (2)
GSE26970 Post-transcriptional generation of miRNA variants by multiple nucleotidyl transferases contributes to miRNA transcriptome complexity
GSE29904 Post-transcriptional generation of miRNA variants by multiple nucleotidyl transferases contributes to miRNA transcriptome complexity (normal prostate and prostate cells)
Relations
BioSample SAMN02198283

Supplementary file Size Download File type/resource
GSM740471_psc_unique.fa.gz 46.1 Kb (ftp)(http) FA
Raw data not provided for this record
Processed data provided as supplementary file

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