|
Status |
Public on Oct 25, 2012 |
Title |
90708_08259T2 |
Sample type |
RNA |
|
|
Source name |
08259T2
|
Organism |
Homo sapiens |
Characteristics |
tissue: Tumor
|
Extracted molecule |
total RNA |
Extraction protocol |
RNA was extracted with Trizol reagent, followed by clean-up and DNase I treatment with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
|
Label |
biotin
|
Label protocol |
Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays
|
|
|
Hybridization protocol |
Standard Illumina hybridization protocol
|
Scan protocol |
Standard Illumina scanning protocol
|
Data processing |
The data were normalized using quantile normalization
|
|
|
Submission date |
Jun 15, 2011 |
Last update date |
Oct 25, 2012 |
Contact name |
Joanna Dawn Holbrook |
E-mail(s) |
Joanna_Holbrook@sics.a-star.edu.sg
|
Organization name |
Singapore Institute of Clinical Sciences
|
Street address |
30 Medical Drive
|
City |
Singapore |
ZIP/Postal code |
117609 |
Country |
Singapore |
|
|
Platform ID |
GPL6947 |
Series (2) |
GSE29998 |
Deep sequencing of gastric carcinoma reveals somatic mutations relevant to personalized medicine [Illumina mRNA expression array data] |
GSE29999 |
Deep sequencing of gastric carcinoma reveals somatic mutations relevant to personalized medicine |
|