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Sample GSM7462062 Query DataSets for GSM7462062
Status Public on Jun 09, 2023
Title 39A2-1
Sample type SRA
 
Source name CAR-T
Organism Homo sapiens
Characteristics treatment: 2rounds of stimulation
cell type: CAR-T
Extracted molecule total RNA
Extraction protocol positive CAR-T cell total RNA was extracted using RNeasy Plus mini isolation kit (Qiagen).
Library preparations were performed using a NEBNext® Ultra™RNA Library Prep Kit for Illumina according to manufacturer’s instruction.
 
Library strategy RNA-Seq
Library source transcriptomic
Library selection cDNA
Instrument model Illumina NovaSeq 6000
 
Description Biol rep1
Data processing Fastq files generated by sequencing were aligned and mapped using STAR with the human genome assembly version GRCh38.
Assembly: Ensembl GRCh38
Supplementary files format and content: Tab-delimited text files contain read counts after alignment.
 
Submission date Jun 06, 2023
Last update date Jun 09, 2023
Contact name Sidi Chen
E-mail(s) sidi.chen@yale.edu
Organization name Yale University
Street address 850 West Campus Drive
City West Haven
State/province CT
ZIP/Postal code 06516
Country USA
 
Platform ID GPL24676
Series (2)
GSE234306 CTLA-4 tail fusion enhances CAR-T anti-tumor immunity [bulk RNA-seq]
GSE234307 CTLA-4 tail fusion enhances CAR-T anti-tumor immunity
Relations
BioSample SAMN35652126
SRA SRX20607754

Supplementary file Size Download File type/resource
GSM7462062_39A2-1_alignedReadsPerGene.out.tab.gz 311.0 Kb (ftp)(http) TAB
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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