|
Status |
Public on Mar 19, 2024 |
Title |
KO1 [7C] |
Sample type |
SRA |
|
|
Source name |
lung
|
Organism |
Mus musculus |
Characteristics |
tissue: lung strain background: C57BL/6 genotype: KO
|
Extracted molecule |
total RNA |
Extraction protocol |
Direct-zol RNA Microprep Library preparation, Takara SMARTer® Stranded Total RNA-Seq Kit v3 - Pico Input
|
|
|
Library strategy |
RNA-Seq |
Library source |
transcriptomic |
Library selection |
cDNA |
Instrument model |
Illumina NovaSeq 6000 |
|
|
Data processing |
cellranger pipeline Seurat integration Assembly: mm10 Supplementary files format and content: matrix files to analyse in seurat or other packages
|
|
|
Submission date |
Jul 03, 2023 |
Last update date |
Mar 19, 2024 |
Contact name |
Bastian Opitz |
Organization name |
Charité – Universitätsmedizin Berlin
|
Department |
Department of Infectious Diseases, Respiratory Medicine and Critical Care
|
Street address |
Augustenburgerplatz 1
|
City |
Berlin |
ZIP/Postal code |
13353 |
Country |
Germany |
|
|
Platform ID |
GPL24247 |
Series (2) |
GSE236341 |
IL-33 controls IL-22-dependent antibacterial defense by modulating the microbiota [bulk RNA-seq] |
GSE236344 |
IL-33 controls IL-22-dependent antibacterial defense by modulating the microbiota. |
|
Relations |
BioSample |
SAMN36272439 |
SRA |
SRX20867135 |