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Sample GSM7528216 Query DataSets for GSM7528216
Status Public on Mar 19, 2024
Title KO1 [7C]
Sample type SRA
 
Source name lung
Organism Mus musculus
Characteristics tissue: lung
strain background: C57BL/6
genotype: KO
Extracted molecule total RNA
Extraction protocol Direct-zol RNA Microprep
Library preparation, Takara SMARTer® Stranded Total RNA-Seq Kit v3 - Pico Input
 
Library strategy RNA-Seq
Library source transcriptomic
Library selection cDNA
Instrument model Illumina NovaSeq 6000
 
Data processing cellranger pipeline
Seurat integration
Assembly: mm10
Supplementary files format and content: matrix files to analyse in seurat or other packages
 
Submission date Jul 03, 2023
Last update date Mar 19, 2024
Contact name Bastian Opitz
Organization name Charité – Universitätsmedizin Berlin
Department Department of Infectious Diseases, Respiratory Medicine and Critical Care
Street address Augustenburgerplatz 1
City Berlin
ZIP/Postal code 13353
Country Germany
 
Platform ID GPL24247
Series (2)
GSE236341 IL-33 controls IL-22-dependent antibacterial defense by modulating the microbiota [bulk RNA-seq]
GSE236344 IL-33 controls IL-22-dependent antibacterial defense by modulating the microbiota.
Relations
BioSample SAMN36272439
SRA SRX20867135

Supplementary file Size Download File type/resource
GSM7528216_feature_counts.P1153_ko1.all_mates.feature_counts_ignoreDups.txt.gz 3.3 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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