|
| Status |
Public on Mar 09, 2024 |
| Title |
HC_M1P1_A10 |
| Sample type |
SRA |
| |
|
| Source name |
posteromedial nucleus of the cortical amygdala
|
| Organism |
Mus musculus |
| Characteristics |
tissue: posteromedial nucleus of the cortical amygdala
|
| Treatment protocol |
Food Transmitted Food Preference paradigm
|
| Extracted molecule |
polyA RNA |
| Extraction protocol |
OligodT primers were used to enrich mRNA
Brain tissues were dissociated with Worthington Papain Digestion Kit RNA libraries were prepared using smart seq 2
|
| |
|
| Library strategy |
RNA-Seq |
| Library source |
transcriptomic |
| Library selection |
cDNA |
| Instrument model |
Illumina NovaSeq 6000 |
| |
|
| Description |
Smartseq
cell by gene matrix
|
| Data processing |
Fastq reads were mapped with STAR(2.7.9a)
Assembly: mm10
Supplementary files format and content: Cell by gene matrix format
|
| |
|
| Submission date |
Feb 23, 2024 |
| Last update date |
Mar 09, 2024 |
| Contact name |
Wenfei Sun |
| E-mail(s) |
Wenfei-sun@stanford.edu
|
| Organization name |
Stanford University
|
| Street address |
318 Campus Dr.
|
| City |
Stanford |
| ZIP/Postal code |
94305 |
| Country |
USA |
| |
|
| Platform ID |
GPL24247 |
| Series (1) |
| GSE256522 |
Single cell RNAseq of brian cells in the cortical amygdala with social transmitted food memory |
|
| Relations |
| BioSample |
SAMN40093584 |
| SRA |
SRX23726834 |
