|
Status |
Public on Mar 09, 2024 |
Title |
HC_M1P1_A18 |
Sample type |
SRA |
|
|
Source name |
posteromedial nucleus of the cortical amygdala
|
Organism |
Mus musculus |
Characteristics |
tissue: posteromedial nucleus of the cortical amygdala
|
Treatment protocol |
Food Transmitted Food Preference paradigm
|
Extracted molecule |
polyA RNA |
Extraction protocol |
OligodT primers were used to enrich mRNA Brain tissues were dissociated with Worthington Papain Digestion Kit RNA libraries were prepared using smart seq 2
|
|
|
Library strategy |
RNA-Seq |
Library source |
transcriptomic |
Library selection |
cDNA |
Instrument model |
Illumina NovaSeq 6000 |
|
|
Description |
Smartseq cell by gene matrix
|
Data processing |
Fastq reads were mapped with STAR(2.7.9a) Assembly: mm10 Supplementary files format and content: Cell by gene matrix format
|
|
|
Submission date |
Feb 23, 2024 |
Last update date |
Mar 09, 2024 |
Contact name |
Wenfei Sun |
E-mail(s) |
Wenfei-sun@stanford.edu
|
Organization name |
Stanford University
|
Street address |
318 Campus Dr.
|
City |
Stanford |
ZIP/Postal code |
94305 |
Country |
USA |
|
|
Platform ID |
GPL24247 |
Series (1) |
GSE256522 |
Single cell RNAseq of brian cells in the cortical amygdala with social transmitted food memory |
|
Relations |
BioSample |
SAMN40093577 |
SRA |
SRX23725334 |