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Sample GSM824801 Query DataSets for GSM824801
Status Public on Jan 01, 2013
Title +DEX -CHX, rep3
Sample type RNA
Source name Root/protoplasts, +DEX -CHX
Organism Arabidopsis thaliana
Characteristics ecotype: Columbia
tissue: root/protoplasts
treatment: +DEX -CHX
Treatment protocol Transformed protoplasts were treated with combinations of CHX (35 µM) or DEX (10 µM). CHX blocks translation into proteins and DEX induced the transcription factor nuclear localization.
Growth protocol Plants are grown on MS/2 media.
Extracted molecule total RNA
Extraction protocol QIAGEN Kit.
Label Biotin
Label protocol NuGEN Kit.
Hybridization protocol Affymetrix recommendations.
Scan protocol Affymetrix recommendations.
Description ABI3-GR_6
Data processing Mas5 [R].
Submission date Oct 31, 2011
Last update date Aug 15, 2018
Contact name Gabriel Krouk
Organization name CNRS
Department Biology
Street address 2 Place Pierre Viala
City Montpellier
ZIP/Postal code 34060
Country France
Platform ID GPL198
Series (1)
GSE33344 ABI3 TARGET approach
Reanalyzed by GSE118579

Data table header descriptions
VALUE MAS5.0 signal intensity

Data table
244901_at 3973.2362
244902_at 1029.270408
244903_at 1551.563135
244904_at 41.69305316
244905_at 287.4687059
244906_at 1205.110151
244907_at 717.1681094
244908_at 327.0131419
244909_at 296.3223313
244910_s_at 426.7492802
244911_at 501.653101
244912_at 385.03148
244913_at 1011.204512
244914_at 2588.740385
244915_s_at 775.7967957
244916_at 213.564419
244917_at 259.2271854
244918_at 287.9089289
244919_at 158.7303547
244920_s_at 1161.88902

Total number of rows: 22810

Table truncated, full table size 490 Kbytes.

Supplementary file Size Download File type/resource
GSM824801.CEL.gz 1.8 Mb (ftp)(http) CEL
Processed data included within Sample table

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