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Sample GSM824804 Query DataSets for GSM824804
Status Public on Jan 01, 2013
Title -DEX +CHX, rep3
Sample type RNA
 
Source name Root/protoplasts, -DEX +CHX
Organism Arabidopsis thaliana
Characteristics ecotype: Columbia
tissue: root/protoplasts
treatment: -DEX +CHX
Treatment protocol Transformed protoplasts were treated with combinations of CHX (35 µM) or DEX (10 µM). CHX blocks translation into proteins and DEX induced the transcription factor nuclear localization.
Growth protocol Plants are grown on MS/2 media.
Extracted molecule total RNA
Extraction protocol QIAGEN Kit.
Label Biotin
Label protocol NuGEN Kit.
 
Hybridization protocol Affymetrix recommendations.
Scan protocol Affymetrix recommendations.
Description ABI3-GR_9
Data processing Mas5 [R].
 
Submission date Oct 31, 2011
Last update date Aug 15, 2018
Contact name Gabriel Krouk
Organization name CNRS
Department Biology
Lab B&PMP
Street address 2 Place Pierre Viala
City Montpellier
ZIP/Postal code 34060
Country France
 
Platform ID GPL198
Series (1)
GSE33344 ABI3 TARGET approach
Relations
Reanalyzed by GSE118579

Data table header descriptions
ID_REF
VALUE MAS5.0 signal intensity

Data table
ID_REF VALUE
244901_at 7881.179088
244902_at 1545.14268
244903_at 885.635268
244904_at 63.32108563
244905_at 377.5495199
244906_at 1144.828067
244907_at 528.18721
244908_at 515.7514397
244909_at 351.5507252
244910_s_at 343.7570493
244911_at 1283.168384
244912_at 241.8736128
244913_at 699.5178125
244914_at 2445.897221
244915_s_at 748.2622766
244916_at 364.12968
244917_at 325.4742245
244918_at 371.5938691
244919_at 260.8554137
244920_s_at 834.7870931

Total number of rows: 22810

Table truncated, full table size 490 Kbytes.




Supplementary file Size Download File type/resource
GSM824804.CEL.gz 1.9 Mb (ftp)(http) CEL
Processed data included within Sample table

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