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Sample GSM824806 Query DataSets for GSM824806
Status Public on Jan 01, 2013
Title +DEX +CHX, rep2
Sample type RNA
 
Source name Root/protoplasts, +DEX +CHX
Organism Arabidopsis thaliana
Characteristics ecotype: Columbia
tissue: root/protoplasts
treatment: +DEX +CHX
Treatment protocol Transformed protoplasts were treated with combinations of CHX (35 µM) or DEX (10 µM). CHX blocks translation into proteins and DEX induced the transcription factor nuclear localization.
Growth protocol Plants are grown on MS/2 media.
Extracted molecule total RNA
Extraction protocol QIAGEN Kit.
Label Biotin
Label protocol NuGEN Kit.
 
Hybridization protocol Affymetrix recommendations.
Scan protocol Affymetrix recommendations.
Description ABI3-GR_11
Data processing Mas5 [R].
 
Submission date Oct 31, 2011
Last update date Aug 15, 2018
Contact name Gabriel Krouk
Organization name CNRS
Department Biology
Lab B&PMP
Street address 2 Place Pierre Viala
City Montpellier
ZIP/Postal code 34060
Country France
 
Platform ID GPL198
Series (1)
GSE33344 ABI3 TARGET approach
Relations
Reanalyzed by GSE118579

Data table header descriptions
ID_REF
VALUE MAS5.0 signal intensity

Data table
ID_REF VALUE
244901_at 4596.851673
244902_at 1328.86772
244903_at 1746.216298
244904_at 78.31933136
244905_at 421.3916827
244906_at 1556.651351
244907_at 1195.274964
244908_at 721.2750477
244909_at 318.851064
244910_s_at 705.4595528
244911_at 1022.994094
244912_at 283.9938098
244913_at 1689.954333
244914_at 4523.376397
244915_s_at 860.642435
244916_at 162.0723439
244917_at 195.1374483
244918_at 259.9823654
244919_at 243.7914385
244920_s_at 1085.233206

Total number of rows: 22810

Table truncated, full table size 490 Kbytes.




Supplementary file Size Download File type/resource
GSM824806.CEL.gz 1.8 Mb (ftp)(http) CEL
Processed data included within Sample table

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