|
| Status |
Public on Nov 05, 2024 |
| Title |
CCL-167 |
| Sample type |
genomic |
| |
|
| Source name |
CCL-167
|
| Organism |
Mus musculus |
| Characteristics |
cell line: Hematologic cell line
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
Genomic DNA was extracted and purified from the different cell lines using Qiagen DNeasy Kit according to standard instructions
|
| Label |
Cy3 and Cy5
|
| Label protocol |
Ilumina methylation microarrays
|
| |
|
| Hybridization protocol |
Illumina HIIScanSQ with Autoloader system
|
| Scan protocol |
Illumina HIIScanSQ with Autoloader system
|
| Description |
Illumina HiScanSQ
Noguera-Castells_Average_Beta_Mus_Musculus.csv
|
| Data processing |
Data was processed using sesame package pipeline in R environment
hg19 and mm10
.csv format containing Average Beta value and detection P.value
|
| |
|
| Submission date |
Jun 21, 2024 |
| Last update date |
Nov 05, 2024 |
| Contact name |
Manel Esteller |
| E-mail(s) |
pebc.share@gmail.com
|
| Organization name |
Josep Carreras Leukaemia Research Institute (IJC)
|
| Department |
Cancer and Leukemia Epigenetics and Biology Program (PEBCL)
|
| Lab |
Cancer Epigenetics
|
| Street address |
Ctra. de Can Ruti, Cami de les Escoles s/n
|
| City |
Badalona |
| State/province |
Barcelona |
| ZIP/Postal code |
08916 |
| Country |
Spain |
| |
|
| Platform ID |
GPL30650 |
| Series (1) |
| GSE270494 |
A DNA methylation database of human and mouse hematological malignancy cell lines |
|
