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Sample GSM84 Query DataSets for GSM84
Status Public on Jul 19, 2001
Title Renal cell carcinoma: rccc-1, tumor 2 (part 1 of 2)
Sample type RNA
 
Source name renal clear cell carcinoma (primary tumor)
Organism Homo sapiens
Extracted molecule total RNA
 
Description clinical.stage=I
grade.of.malignancy=2
type=clearcell
tumor.site=kidney
multiplefoci=TRUE
survival.months=16
died=FALSE
tumorsize.cm=6
sex=m
age=69
RNA=poly-A+
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal clear cell carcinoma
Keywords = kidney
Lot batch = batch=ReImage3_nov99 filter=3624248 reuse=3 date=23-Feb-2000
 
Submission date Jul 19, 2001
Last update date May 27, 2005
Contact name Wolfgang Huber
E-mail(s) w.huber@dkfz.de
Phone +49-6221-424709
Fax +49-6221-423470
URL http://www.dkfz-heidelberg.de/abt0840
Organization name German Cancer Research Center
Department Molecular Genome Analysis
Street address Im Neuenheimer Feld 280
City Heidelberg
ZIP/Postal code 69120
Country Germany
 
Platform ID GPL9
Series (1)
GSE3 Renal Cell Carcinoma Differential Expression

Data table header descriptions
ID_REF
SIGNAL_RAW Mean spot intensity
BKD_RAW 33 percent quantile of intensities of surrounding pixels within a 4x4 block
VALUE SIGNAL_RAW-SIGNAL_BKD

Data table
ID_REF SIGNAL_RAW BKD_RAW VALUE
1 48601 34225 14376
2 7195 34225 -27030
3 31537 34225 -2688
4 12951 34225 -21274
5 268341 34225 234116
6 111449 34225 77224
7 2733692 34225 2699467
8 44520 34225 10295
9 42965 34225 8740
10 20229 34225 -13996
11 309928 34225 275703
12 90545 34225 56320
13 2358101 34225 2323876
14 26352 34225 -7873
15 12114 34225 -22111
16 15740 34225 -18485
17 12425 17956 -5531
18 20976 17956 3020
19 14692 17956 -3264
20 8890 17956 -9066

Total number of rows: 36864

Table truncated, full table size 845 Kbytes.




Supplementary data files not provided

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