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Sample GSM8510749 Query DataSets for GSM8510749
Status Public on Sep 12, 2024
Title D1_NIL-NIL
Sample type genomic
 
Source name Monocyte-Macrophages
Organism Homo sapiens
Characteristics cell type: Monocyte-Macrophages
treatment: NIL
Treatment protocol Treated with LPS alone or in Combination with TCA inhbitors
Growth protocol Plastic Adhesion derived MDMs grown in RPMI+ 10% Human AB-serum + L-gluatmine+ penicillin and streprtomycin (1%)
Extracted molecule genomic DNA
Extraction protocol DNA extarcted using QIAGEN DNA kit
Label cy3,cy5
Label protocol As instructed by Illumina
 
Hybridization protocol Illumina Infinum BeadArray protocol
Scan protocol iScan Illumina
Description SAMPLE 1
Infinium Methylation EPIC
Data processing Minfi package in R
Average Beta
 
Submission date Sep 11, 2024
Last update date Sep 12, 2024
Contact name Abhimanyu -
E-mail(s) Abhimanyua@uchicago.edu
Organization name Baylor College of Medicine
Lab DiNardo Lab
Street address one Baylor Plaza
City Houston
State/province Texas
ZIP/Postal code 77054
Country USA
 
Platform ID GPL21145
Series (1)
GSE276988 TCA metabolism regulates DNA hypermethylation in LPS and Mycobacterium tuberculosis–induced immune tolerance

Supplementary file Size Download File type/resource
GSM8510749_205848670028_R02C01_Grn.idat.gz 7.0 Mb (ftp)(http) IDAT
GSM8510749_205848670028_R02C01_Red.idat.gz 7.1 Mb (ftp)(http) IDAT

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