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Sample GSM8592413 Query DataSets for GSM8592413
Status Public on Nov 08, 2024
Title Atopic Dermatitis 019
Sample type RNA
 
Source name skin biopsy
Organism Homo sapiens
Characteristics disease: Atopic Dermatitis
Treatment protocol samples were snap-frozen without any treatment
Growth protocol NA
Extracted molecule total RNA
Extraction protocol mRNA expression of 600 targets was analysed with the nCounter Human Immunology V2 panel including 20 customized probes (Nanostring Technologies, Seattle, WA, USA) on the nCounterĀ® platform (Nanostring Technologies) using 100 ng of RNA per skin sample.
Label NanoString indexing
Label protocol NanoString indexing
 
Hybridization protocol standard protocol
Scan protocol standard protocol
Description internal positive and negative controls were used
AD_019
Data processing Data were normalized and log2 transformed using nSolverĀ® 4.0 (Nanostring Technologies). Basically, housekeeping probes to be used for normalization are selected based on the geNorm algorithm as implemented in the NormqPCR R library
 
Submission date Oct 24, 2024
Last update date Nov 08, 2024
Contact name JEREMY DI DOMIZIO
E-mail(s) jeremy.di-domizio@chuv.ch
Phone +41213147669
Organization name CHUV
Street address Av Boveresses 155, 1066 Epalinges
City Lausanne
State/province Vaud
ZIP/Postal code 1066
Country Switzerland
 
Platform ID GPL19963
Series (1)
GSE280220 Immune Modules to guide Diagnosis and Personalized Treatment of Inflammatory Skin Diseases

Supplementary file Size Download File type/resource
GSM8592413_AD_019.RCC.gz 6.9 Kb (ftp)(http) RCC

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