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Sample GSM86 Query DataSets for GSM86
Status Public on Jul 19, 2001
Title Renal cell carcinoma: rccc-2, tumor 1 (part 1 of 2)
Sample type RNA
 
Source name renal clear cell carcinoma (primary tumor)
Organism Homo sapiens
Extracted molecule total RNA
 
Description clinical.stage=IV
grade.of.malignancy=2
type=clearcell
tumor.site=kidney
multiplefoci=FALSE
survival.months=30
died=FALSE
tumorsize.cm=4
sex=m
age=48
RNA=poly-A+
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal clear cell carcinoma
Keywords = kidney
Lot batch = batch=ReImage2 filter=180166 reuse=3 date=16-Jan-1999
 
Submission date Jul 19, 2001
Last update date May 27, 2005
Contact name Wolfgang Huber
E-mail(s) w.huber@dkfz.de
Phone +49-6221-424709
Fax +49-6221-423470
URL http://www.dkfz-heidelberg.de/abt0840
Organization name German Cancer Research Center
Department Molecular Genome Analysis
Street address Im Neuenheimer Feld 280
City Heidelberg
ZIP/Postal code 69120
Country Germany
 
Platform ID GPL9
Series (1)
GSE3 Renal Cell Carcinoma Differential Expression

Data table header descriptions
ID_REF
SIGNAL_RAW Mean spot intensity
BKD_RAW 33 percent quantile of intensities of surrounding pixels within a 4x4 block
VALUE SIGNAL_RAW-SIGNAL_BKD

Data table
ID_REF SIGNAL_RAW BKD_RAW VALUE
1 10264 19321 -9057
2 15422 19321 -3899
3 21126 19321 1805
4 16232 19321 -3089
5 19870 19321 549
6 1020813 19321 1001492
7 21612 19321 2291
8 32367 19321 13046
9 43173 19321 23852
10 20874 19321 1553
11 25782 19321 6461
12 20860 19321 1539
13 29675 19321 10354
14 9756 19321 -9565
15 9299 19321 -10022
16 14117 19321 -5204
17 7820 18496 -10676
18 28569 18496 10073
19 8609 18496 -9887
20 14063 18496 -4433

Total number of rows: 36864

Table truncated, full table size 859 Kbytes.




Supplementary data files not provided

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