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Sample GSM862174 Query DataSets for GSM862174
Status Public on Feb 01, 2012
Title Cardiomyocytes derived from DCM iPSC, rep1
Sample type RNA
 
Source name DCM iPSC
Organism Homo sapiens
Characteristics cell type: Cardiomyocytes (derived from DCM iPSC)
genotype/variation: DCM
gene therapy: control
Treatment protocol iPSC were treated by Adenovirus-Serca2a
Growth protocol iPSCs were maitained with mTESR-1 medium on matrigel coated surfaces. iPSC-derived cardiomyocytes were maitained with DMEM plus 10% FBS in tissue culture dishes.
Extracted molecule total RNA
Extraction protocol Extraction of total RNA was performed according to the manufacturer's instructions.
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol
 
Hybridization protocol Hybridization were followed standard Affymetrix protocol in Affymetrix GeneChip Hybridization Oven 640
Scan protocol GeneChips were scanned using theAffymetrix GeneChip Scanner 3000 7G
Description Gene expression data from iPSC
DCM-1
DCM-1.CEL
Data processing The data were analyzed with Affymetrix Expression Console using Affymetrix default analysis settings and RMA as normalization method.
 
Submission date Jan 14, 2012
Last update date Feb 01, 2012
Contact name Leng Han
E-mail(s) hanleng0926@hotmail.com
Organization name Stanford University
Street address 265 Campus Dr
City Stanford
State/province CA
ZIP/Postal code 94305
Country USA
 
Platform ID GPL6244
Series (1)
GSE35108 Expression data from patient iPSC and iPSC-derived cardiomyocytes

Data table header descriptions
ID_REF
VALUE RMA log2 value

Data table
ID_REF VALUE
7892501 3.966795
7892502 6.414872
7892503 4.420493
7892504 9.56333
7892505 4.702321
7892506 6.500333
7892507 7.034579
7892508 7.975048
7892509 12.70749
7892510 7.231445
7892511 6.661918
7892512 8.455766
7892513 4.501823
7892514 10.82884
7892515 11.34204
7892516 5.385311
7892517 7.824347
7892518 4.472363
7892519 6.552316
7892520 10.8973

Total number of rows: 33297

Table truncated, full table size 549 Kbytes.




Supplementary file Size Download File type/resource
GSM862174.CEL.gz 4.3 Mb (ftp)(http) CEL
Processed data included within Sample table

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