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GEO accession:
Sample GSM8646
Query DataSets for GSM8646
Status
Public on Jul 30, 2003
Title
AtRoot14DayMSControl
Sample type
SAGE
Anchor
NlaIII
Tag Count
32104
Tag Length
10
Source name
Seedling roots
Organism
Arabidopsis thaliana
Extracted molecule
total RNA
Description
14-day old sterile seedlings grown submerged in Murashige and Skoog (MS) medium and dosed 24 h with DMSO at 0.0015% (v:v) final concentration.
Keywords = phytoremediation, munitions, TNT, RDX, explosives
Submission date
Jul 25, 2003
Last update date
Nov 19, 2008
Contact name
Jeffrey F.D. Dean
E-mail(s)
jeffdean@uga.edu
Phone
1-706-542-1710
Fax
1-706-583-0881
Organization name
University of Georgia
Department
Warnell School of Forest Resources
Street address
City
Athens
State/province
GA
ZIP/Postal code
30602
Country
USA
Platform ID
GPL25
Series (1)
GSE560
AtSeedlingRootMunitionResponses
Data table header descriptions
TAG
COUNT
TPM
tags per million
Data table
TAG
COUNT
TPM
AAAAAAAAAA
79
2460.75
AAAAAAAAAG
2
62.30
AAAAAAACAA
1
31.15
AAAAAAAGGA
1
31.15
AAAAAAATCA
16
498.38
AAAAAACCAA
1
31.15
AAAAAAGAAA
2
62.30
AAAAAAGATT
1
31.15
AAAAACAAAA
1
31.15
AAAAACATAT
2
62.30
AAAAACATTG
1
31.15
AAAAACTCTG
1
31.15
AAAAACTTGG
1
31.15
AAAAAGAAAA
21
654.12
AAAAAGAAGA
1
31.15
AAAAAGATTC
1
31.15
AAAAAGATTG
1
31.15
AAAAAGCAAA
1
31.15
AAAAAGCAGA
1
31.15
AAAAAGCCAT
1
31.15
Total number of rows:
12721
Table truncated, full table size
238 Kbytes
.
Supplementary data files not provided
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