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Sample GSM90 Query DataSets for GSM90
Status Public on Jul 19, 2001
Title Renal cell carcinoma: rccc-3, tumor 1 (part 1 of 2)
Sample type RNA
 
Source name renal clear cell carcinoma (primary tumor)
Organism Homo sapiens
Extracted molecule total RNA
 
Description clinical.stage=III
grade.of.malignancy=2
type=clearcell
tumor.site=kidney
multiplefoci=TRUE
survival.months=21
died=FALSE
tumorsize.cm=3.5
sex=m
age=50
RNA=poly-A+
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal clear cell carcinoma
Keywords = kidney
Lot batch = batch=ReImage2 filter=180164 reuse=3 date=16-Jan-1999
 
Submission date Jul 19, 2001
Last update date May 27, 2005
Contact name Wolfgang Huber
E-mail(s) w.huber@dkfz.de
Phone +49-6221-424709
Fax +49-6221-423470
URL http://www.dkfz-heidelberg.de/abt0840
Organization name German Cancer Research Center
Department Molecular Genome Analysis
Street address Im Neuenheimer Feld 280
City Heidelberg
ZIP/Postal code 69120
Country Germany
 
Platform ID GPL9
Series (1)
GSE3 Renal Cell Carcinoma Differential Expression

Data table header descriptions
ID_REF
SIGNAL_RAW Mean spot intensity
BKD_RAW 33 percent quantile of intensities of surrounding pixels within a 4x4 block
VALUE SIGNAL_RAW-SIGNAL_BKD

Data table
ID_REF SIGNAL_RAW BKD_RAW VALUE
1 15594 33489 -17895
2 29721 33489 -3768
3 23377 33489 -10112
4 27184 33489 -6305
5 56281 33489 22792
6 2878896 33489 2845407
7 41108 33489 7619
8 208927 33489 175438
9 86183 33489 52694
10 16559 33489 -16930
11 114927 33489 81438
12 33588 33489 99
13 18029 33489 -15460
14 21033 33489 -12456
15 31664 33489 -1825
16 24459 33489 -9030
17 34022 39601 -5579
18 27159 39601 -12442
19 41884 39601 2283
20 34476 39601 -5125

Total number of rows: 36864

Table truncated, full table size 863 Kbytes.




Supplementary data files not provided

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