|
Status |
Public on Jun 09, 2015 |
Title |
MCF7_H3K27me3_AVG_Beta |
Sample type |
genomic |
|
|
Source name |
breast cancer cell lines
|
Organism |
Homo sapiens |
Characteristics |
cell line: MCF7_H3K27me3 cell type: Luminal cells
|
Extracted molecule |
genomic DNA |
Extraction protocol |
standard procedure
|
Label |
Cy5 and Cy3
|
Label protocol |
Standard Illumina Protocol
|
|
|
Hybridization protocol |
bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human Methylation27 Beadchip using standard Illumina protocol
|
Scan protocol |
Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
|
Description |
HumanMethylation27_6
|
Data processing |
BeadStudio software (version 2011.1)
|
|
|
Submission date |
Jun 18, 2012 |
Last update date |
Jun 09, 2015 |
Contact name |
Kornelia Polyak |
E-mail(s) |
kornelia_polyak@dfci.harvard.edu
|
Phone |
617-632-2106
|
Organization name |
Dana-Farber Cancer Institute
|
Department |
Medical Oncology
|
Lab |
Polyak
|
Street address |
450 Brookline Ave
|
City |
Boston |
State/province |
MA |
ZIP/Postal code |
02215 |
Country |
USA |
|
|
Platform ID |
GPL8490 |
Series (2) |
GSE38548 |
Somatic cell fusions reveal extensive heterogeneity in basal-like breast cancer |
GSE38791 |
Somatic cell fusions reveal extensive heterogeneity in basal-like breast cancer [methylation27] |
|