U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    LINC02944 long intergenic non-protein coding RNA 2944 [ Homo sapiens (human) ]

    Gene ID: 101927760, updated on 17-Jun-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    LINC02944provided by HGNC
    Official Full Name
    long intergenic non-protein coding RNA 2944provided by HGNC
    Primary source
    HGNC:HGNC:55959
    See related
    Ensembl:ENSG00000238276
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LINC02944 in Genome Data Viewer
    Location:
    10q26.11
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (118241505..118247874)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (119136334..119143063)

    Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105378504 Neighboring gene VISTA enhancer hs1551 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr10:119739304-119740503 Neighboring gene RAB11 family interacting protein 2 Neighboring gene ReSE screen-validated silencer GRCh37_chr10:119795138-119795331 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2863 Neighboring gene cancer susceptibility 2 Neighboring gene ReSE screen-validated silencer GRCh37_chr10:119907111-119907355 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr10:119963650-119964234 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr10:119964235-119964819 Neighboring gene Sharpr-MPRA regulatory region 3281 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr10:119973305-119974504 Neighboring gene NANOG hESC enhancer GRCh37_chr10:120025545-120026208 Neighboring gene H3K27ac hESC enhancer GRCh37_chr10:120044911-120045412 Neighboring gene H3K27ac hESC enhancer GRCh37_chr10:120045413-120045912 Neighboring gene VISTA enhancer hs672 Neighboring gene family with sequence similarity 204 member A Neighboring gene H3K27ac hESC enhancer GRCh37_chr10:120101641-120102140 Neighboring gene long intergenic non-protein coding RNA 867

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Expression

    Go to the top of the page Help
    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    Phenotypes

    Go to the top of the page Help

    Review eQTL and phenotype association data in this region using PheGenI

    Variation

    Go to the top of the page Help

    See studies and variants in dbVar

    See Variation Viewer (GRCh38)

    Genotypes

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

      Range
      118241505..118247874
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_001747602.2 RNA Sequence

    2. XR_946349.3 RNA Sequence

      Related
      ENST00000431695.6

    3. XR_428818.4 RNA Sequence

      Related
      ENST00000436975.7

    4. XR_001747603.2 RNA Sequence

      Related
      ENST00000653445.1

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060934.1 Alternate T2T-CHM13v2.0

      Range
      119136334..119143063
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007081012.1 RNA Sequence

    2. XR_007081011.1 RNA Sequence

    3. XR_007081010.1 RNA Sequence

    4. XR_007081009.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Other Literature Sources
    Molecular Biology Databases
    Research Materials