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    DSP-AS1 DSP antisense RNA 1 [ Homo sapiens (human) ]

    Gene ID: 101928076, updated on 10-Oct-2023

    Summary

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    Official Symbol
    DSP-AS1provided by HGNC
    Official Full Name
    DSP antisense RNA 1provided by HGNC
    Primary source
    HGNC:HGNC:56039
    See related
    Ensembl:ENSG00000261189
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    ABL
    Expression
    Broad expression in heart (RPKM 2.6), skin (RPKM 1.7) and 19 other tissues See more
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    Genomic context

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    See DSP-AS1 in Genome Data Viewer
    Location:
    6p24.3
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (7540451..7543083, complement)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (7409493..7412123, complement)

    Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene MED14-independent group 3 enhancer GRCh37_chr6:7505263-7506462 Neighboring gene ribosomal protein S26 pseudogene 29 Neighboring gene IDH1 pseudogene 1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:7526687-7527188 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr6:7532914-7533459 Neighboring gene VISTA enhancer hs2285 Neighboring gene desmoplakin Neighboring gene VISTA enhancer hs2191 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:7590188-7590927 Neighboring gene small nuclear ribonucleoprotein U11/U12 subunit 48 Neighboring gene Sharpr-MPRA regulatory region 13737 Neighboring gene ribosomal protein L29 pseudogene 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

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    Related articles in PubMed

    1. APAF1-Binding Long Noncoding RNA Promotes Tumor Growth and Multidrug Resistance in Gastric Cancer by Blocking Apoptosome Assembly. Wang Q, et al. Adv Sci (Weinh), 2022 Oct. PMID 35975461, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See variants in ClinVar

    See studies and variants in dbVar

    See Variation Viewer (GRCh38)

    Genotypes

    General gene information

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    Other Names

    • APAF1-binding lncRNA

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_183327.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL031058
      Related
      ENST00000687028.2

    2. NR_183328.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL031058

    3. NR_183329.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL031058
      Related
      ENST00000690863.2

    4. NR_183330.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL031058

    5. NR_183331.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL031058

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

      Range
      7540451..7543083 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060930.1 Alternate T2T-CHM13v2.0

      Range
      7409493..7412123 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Molecular Biology Databases