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    Mt1 metallothionein 1 [ Mus musculus (house mouse) ]

    Gene ID: 17748, updated on 12-Nov-2024

    Summary

    Official Symbol
    Mt1provided by MGI
    Official Full Name
    metallothionein 1provided by MGI
    Primary source
    MGI:MGI:97171
    See related
    Ensembl:ENSMUSG00000031765 AllianceGenome:MGI:97171
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    MT-I; Mt-1
    Summary
    Enables copper ion binding activity. Involved in negative regulation of neuron apoptotic process. Acts upstream of or within several processes, including cellular response to chromate; cellular response to zinc ion; and nitric oxide mediated signal transduction. Located in cytosol and lysosome. Is expressed in several structures, including alimentary system; early conceptus; genitourinary system; sensory organ; and ventricular layer. Orthologous to several human genes including MT1A (metallothionein 1A); MT1B (metallothionein 1B); and MT1E (metallothionein 1E). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Broad expression in liver E14.5 (RPKM 1065.3), stomach adult (RPKM 765.6) and 21 other tissues See more
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    Genomic context

    See Mt1 in Genome Data Viewer
    Location:
    8 C5; 8 46.34 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (94905214..94906955)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (94178883..94180327)

    Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 39227 Neighboring gene CapStarr-seq enhancer MGSCv37_chr8:96707225-96707334 Neighboring gene uncharacterized LOC118567560 Neighboring gene metallothionein 2 Neighboring gene STARR-positive B cell enhancer ABC_E3793 Neighboring gene nucleoporin 93 Neighboring gene ribosomal protein L10, pseudogene 5

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (3) 
    • Targeted (2)  1 citation

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables copper ion binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables metal ion binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables metal ion binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables zinc ion binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables zinc ion binding ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables zinc ion binding TAS
    Traceable Author Statement
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cytoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cytoplasm ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in cytosol TAS
    Traceable Author Statement
    more info
     
    located_in lysosome IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in nucleus ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleus ISS
    Inferred from Sequence or Structural Similarity
    more info
     

    General protein information

    Preferred Names
    metallothionein-1
    Names
    metallothionein-I

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_013602.3NP_038630.1  metallothionein-1

      See identical proteins and their annotated locations for NP_038630.1

      Status: VALIDATED

      Source sequence(s)
      AA050166, AC131733, AK018727
      Consensus CDS
      CCDS40438.1
      UniProtKB/Swiss-Prot
      P02802, Q64485
      Related
      ENSMUSP00000034215.7, ENSMUST00000034215.8
      Conserved Domains (1) summary
      pfam00131
      Location:461
      Metallothio; Metallothionein

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000074.7 Reference GRCm39 C57BL/6J

      Range
      94905214..94906955
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006530752.5XP_006530815.1  metallothionein-1 isoform X1

      See identical proteins and their annotated locations for XP_006530815.1

      UniProtKB/TrEMBL
      A0A1D5RLN7, Q3U340
      Related
      ENSMUSP00000148443.2, ENSMUST00000212291.2
      Conserved Domains (1) summary
      cl19543
      Location:132
      Metallothio; Metallothionein