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    LINC00028 long intergenic non-protein coding RNA 28 [ Homo sapiens (human) ]

    Gene ID: 140875, updated on 17-Jun-2024

    Summary

    Official Symbol
    LINC00028provided by HGNC
    Official Full Name
    long intergenic non-protein coding RNA 28provided by HGNC
    Primary source
    HGNC:HGNC:16224
    See related
    Ensembl:ENSG00000233354 AllianceGenome:HGNC:16224
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    C20orf93; NCRNA00028; dJ1093G12.6
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

    See LINC00028 in Genome Data Viewer
    Location:
    20q11.21
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 20 NC_000020.11 (31485778..31487574)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 20 NC_060944.1 (33210005..33211798)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 20 NC_000020.10 (30073581..30075377)

    Chromosome 20 - NC_000020.11Genomic Context describing neighboring genes Neighboring gene defensin beta 124 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 12756 Neighboring gene RRAD and GEM like GTPase 1 Neighboring gene tRNA-Ser (anticodon AGA) 7-1 Neighboring gene CD24 molecule pseudogene 3

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_024358.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AI675392, BX280465
      Related
      ENST00000435497.1

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000020.11 Reference GRCh38.p14 Primary Assembly

      Range
      31485778..31487574
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060944.1 Alternate T2T-CHM13v2.0

      Range
      33210005..33211798
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)