U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    SNORD3C small nucleolar RNA, C/D box 3C [ Homo sapiens (human) ]

    Gene ID: 780853, updated on 2-Nov-2024

    Summary

    Official Symbol
    SNORD3Cprovided by HGNC
    Official Full Name
    small nucleolar RNA, C/D box 3Cprovided by HGNC
    Primary source
    HGNC:HGNC:33191
    See related
    AllianceGenome:HGNC:33191
    Gene type
    snoRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    U3-3; RNU3-3
    Summary
    Predicted to be involved in RNA processing. Predicted to be located in nucleolus. [provided by Alliance of Genome Resources, Nov 2024]
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See SNORD3C in Genome Data Viewer
    Location:
    17p11.2
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 17 NC_000017.11 (19190029..19190245, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 17 NC_060941.1 (19138015..19138225, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (19093342..19093558, complement)

    Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene kynureninase pseudogene 1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:19079065-19079566 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:19079567-19080066 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 8284 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:19092892-19093486 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr17:19093487-19094080 Neighboring gene small nucleolar RNA, C/D box 3A Neighboring gene kynureninase pseudogene 3 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:19117744-19118272 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:19118273-19118802 Neighboring gene uncharacterized protein ENSP00000382042

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Other Names

    • U3 small nucleolar RNA C
    • U3 snoRNA C

    Gene Ontology Provided by GOA

    Process Evidence Code Pubs
    involved_in RNA processing IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in nucleolus IEA
    Inferred from Electronic Annotation
    more info
     

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_006881.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC106017

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000017.11 Reference GRCh38.p14 Primary Assembly

      Range
      19190029..19190245 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060941.1 Alternate T2T-CHM13v2.0

      Range
      19138015..19138225 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)