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    LOC100506274 uncharacterized LOC100506274 [ Homo sapiens (human) ]

    Gene ID: 100506274, updated on 17-Sep-2024

    Summary

    Gene symbol
    LOC100506274
    Gene description
    uncharacterized LOC100506274
    See related
    Ensembl:ENSG00000229727
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Biased expression in testis (RPKM 2.0), brain (RPKM 0.1) and 1 other tissue See more
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    Genomic context

    See LOC100506274 in Genome Data Viewer
    Location:
    2p25.1
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (7421261..7450254)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (7442773..7471761)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (7561392..7590385)

    Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107985847 Neighboring gene uncharacterized LOC105373406 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:7570217-7570950 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:7570951-7571684 Neighboring gene ReSE screen-validated silencer GRCh37_chr2:7597838-7598030 Neighboring gene uncharacterized LOC105373407 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:7695081-7695582 Neighboring gene RNA, U6atac small nuclear 37, pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_038432.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC013460
      Related
      ENST00000419713.5

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

      Range
      7421261..7450254
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060926.1 Alternate T2T-CHM13v2.0

      Range
      7442773..7471761
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)