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    PACRG-AS1 PACRG antisense RNA 1 [ Homo sapiens (human) ]

    Gene ID: 285796, updated on 17-Sep-2024

    Summary

    Official Symbol
    PACRG-AS1provided by HGNC
    Official Full Name
    PACRG antisense RNA 1provided by HGNC
    Primary source
    HGNC:HGNC:27772
    See related
    Ensembl:ENSG00000281692 AllianceGenome:HGNC:27772
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

    See PACRG-AS1 in Genome Data Viewer
    Location:
    6q26
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (163309985..163324473, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (164673581..164688056, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (163731017..163745505, complement)

    Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene parkin coregulated Neighboring gene uncharacterized LOC105378095 Neighboring gene uncharacterized LOC124901548 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:163711905-163712411 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:163712412-163712917 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr6:163730307-163731506 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:163742616-163743116 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:163756229-163757042 Neighboring gene uncharacterized LOC401282 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:163762485-163762985 Neighboring gene Sharpr-MPRA regulatory region 3851 Neighboring gene ribosomal protein L37a pseudogene 4

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    General gene information

    Markers

    Other Names

    • PACRG antisense RNA 1 (non-protein coding)

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_028390.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AK094729, AL031121, DA395577
      Related
      ENST00000626335.2

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

      Range
      163309985..163324473 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060930.1 Alternate T2T-CHM13v2.0

      Range
      164673581..164688056 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)