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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001205311.1 → NP_001192240.1 solute carrier family 12 member 3 isoform 1
See identical proteins and their annotated locations for NP_001192240.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1).
- Source sequence(s)
-
AC128663, AK052691
- Consensus CDS
-
CCDS57632.1
- UniProtKB/Swiss-Prot
-
P59158
- UniProtKB/TrEMBL
- Q543E4, Q62439
- Related
- ENSMUSP00000034218.4, ENSMUST00000034218.5
- Conserved Domains (3) summary
-
- TIGR00930
Location:57 → 1001
- 2a30; K-Cl cotransporter
- pfam03522
Location:653 → 1001
- SLC12; Solute carrier family 12
- pfam08403
Location:43 → 113
- AA_permease_N; Amino acid permease N-terminal
-
NM_019415.2 → NP_062288.2 solute carrier family 12 member 3 isoform 2
See identical proteins and their annotated locations for NP_062288.2
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) uses an alternate in-frame splice site in the 5' coding region, compared to variant 1. This results in a shorter protein (isoform 2), compared to isoform 1.
- Source sequence(s)
-
AI647800, AI882166, AK052691
- UniProtKB/TrEMBL
-
Q62439
- Conserved Domains (3) summary
-
- TIGR00930
Location:57 → 1000
- 2a30; K-Cl cotransporter
- pfam03522
Location:652 → 1000
- SLC12; Solute carrier family 12
- pfam08403
Location:43 → 112
- AA_permease_N; Amino acid permease N-terminal
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000074.7 Reference GRCm39 C57BL/6J
- Range
-
95055737..95092850
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_017312625.1 → XP_017168114.1 solute carrier family 12 member 3 isoform X1
- UniProtKB/TrEMBL
-
Q62439
- Conserved Domains (1) summary
-
- TIGR00930
Location:57 → 1008
- 2a30; K-Cl cotransporter
-
XM_017312626.1 → XP_017168115.1 solute carrier family 12 member 3 isoform X2
- UniProtKB/TrEMBL
-
Q62439
- Conserved Domains (1) summary
-
- TIGR00930
Location:57 → 1007
- 2a30; K-Cl cotransporter
-
XM_017312627.2 → XP_017168116.1 solute carrier family 12 member 3 isoform X3
- Conserved Domains (1) summary
-
- TIGR00930
Location:57 → 561
- 2a30; K-Cl cotransporter
RNA
-
XR_001778414.1 RNA Sequence
-
XR_004934784.1 RNA Sequence