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    lipC spore coat phospholipase B [ Bacillus subtilis subsp. subtilis str. 168 ]

    Gene ID: 938249, updated on 6-Oct-2023

    Summary

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    Gene symbol
    lipC
    Gene description
    spore coat phospholipase B
    Locus tag
    BSU_04110
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
    Lineage
    Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
    Old locus tag
    BSU04110
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    Genomic context

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    Sequence:
    NC_000964.3 (462431..463072)

    NC_000964.3Genomic Context describing neighboring genes Neighboring gene L-5-oxoprolinase (ATP-dependent) subunit C Neighboring gene transcriptional regulator of the pxp operon (IclR family) Neighboring gene hypothetical protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000964.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A novel lipolytic enzyme, YcsK (LipC), located in the spore coat of Bacillus subtilis, is involved in spore germination. Masayama A, et al. J Bacteriol, 2007 Mar. PMID 17220230, Free PMC Article
    2. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
    3. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
    4. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
    5. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. We propose that ycsK should be renamed lipC. This is the first study of a bacterial spore germination-related lipase. [LipC]
      Title: A novel lipolytic enzyme, YcsK (LipC), located in the spore coat of Bacillus subtilis, is involved in spore germination.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    General protein information

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    Preferred Names
    spore coat phospholipase B
    NP_388292.1
    • Evidence 1a: Function from experimental evidences in the studied strain; PubMedId: 9334321, 17220230, 20057119; Product type e: enzyme

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000964.3 Reference assembly

      Range
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_388292.1 spore coat phospholipase B [Bacillus subtilis subsp. subtilis str. 168]

      See identical proteins and their annotated locations for NP_388292.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A0D1KPJ0
      Conserved Domains (1) summary
      COG2755
      Location:4 → 211
      TesA; Lysophospholipase L1 or related esterase [Amino acid transport and metabolism]
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P42969.1

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    Research Materials