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    ydgJ putative transcriptional regulator (MarR family) [ Bacillus subtilis subsp. subtilis str. 168 ]

    Gene ID: 938036, updated on 6-Jun-2024

    Summary

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    Gene symbol
    ydgJ
    Gene description
    putative transcriptional regulator (MarR family)
    Locus tag
    BSU_05670
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
    Lineage
    Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
    Old locus tag
    BSU05670
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    Genomic context

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    Sequence:
    NC_000964.3 (612836..613330, complement)

    NC_000964.3Genomic Context describing neighboring genes Neighboring gene putative transcriptional regulator (MarR family) Neighboring gene putative membrane component Neighboring gene nitroreductase of unidentified specificity (reduces 5-(aziridin-1-yl)-2,4-dinitrobenzamide prodrug) Neighboring gene putative efflux transporter Neighboring gene putative integral inner membrane protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000964.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
    2. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
    3. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
    4. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    putative transcriptional regulator (MarR family)
    NP_388448.1
    • Evidence 3: Putative function from multiple computational evidences; Product type r: regulator

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000964.3 Reference assembly

      Range
      612836..613330 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_388448.1 putative transcriptional regulator (MarR family) [Bacillus subtilis subsp. subtilis str. 168]

      See identical proteins and their annotated locations for NP_388448.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      D4G5S2
      Conserved Domains (1) summary
      smart00347
      Location:45 → 145
      HTH_MARR; helix_turn_helix multiple antibiotic resistance protein
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P96708.1

    Gene LinkOut

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    Other Literature Sources
    Molecular Biology Databases