NEW
Try the new Transcript table
These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001243259.2 → NP_001230188.1 histone H4 transcription factor isoform 2
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) uses an alternate acceptor splice site at the 3' terminal exon compared to variant 1. This results in a frame-shift, and a shorter isoform (2) with a distinct C-terminus compared to isoform 1.
- Source sequence(s)
-
AP002956, AP003391
- Consensus CDS
-
CCDS58188.1
- UniProtKB/Swiss-Prot
-
Q9BQA5
- Related
- ENSP00000436815.1, ENST00000527410.3
- Conserved Domains (2) summary
-
- COG5236
Location:171 → 303
- COG5236; Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]
- sd00017
Location:286 → 306
- ZF_C2H2; C2H2 Zn finger [structural motif]
-
NM_001351957.2 → NP_001338886.1 histone H4 transcription factor isoform 3
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) encodes the longest isoform (3).
- Source sequence(s)
-
AP002956, AP003391
- Conserved Domains (2) summary
-
- COG5236
Location:194 → 326
- COG5236; Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]
- sd00017
Location:309 → 329
- ZF_C2H2; C2H2 Zn finger [structural motif]
-
NM_001351958.2 → NP_001338887.1 histone H4 transcription factor isoform 1
Status: REVIEWED
- Description
- Transcript Variant: This variant (5), as well as variants 1, 2, 6, and 7, encodes isoform 1.
- Source sequence(s)
-
AP002956, AP003391
- Consensus CDS
-
CCDS8414.1
- UniProtKB/Swiss-Prot
- B3KPH6, B4DWB4, E9PQF4, Q96E65, Q9BQA5, Q9Y4M7
- Conserved Domains (2) summary
-
- COG5236
Location:171 → 303
- COG5236; Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]
- sd00017
Location:286 → 306
- ZF_C2H2; C2H2 Zn finger [structural motif]
-
NM_001351959.2 → NP_001338888.1 histone H4 transcription factor isoform 1
Status: REVIEWED
- Description
- Transcript Variant: This variant (6), as well as variants 1, 2, 5, and 7, encodes isoform 1.
- Source sequence(s)
-
AP002956, AP003391
- Consensus CDS
-
CCDS8414.1
- UniProtKB/Swiss-Prot
- B3KPH6, B4DWB4, E9PQF4, Q96E65, Q9BQA5, Q9Y4M7
- Conserved Domains (2) summary
-
- COG5236
Location:171 → 303
- COG5236; Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]
- sd00017
Location:286 → 306
- ZF_C2H2; C2H2 Zn finger [structural motif]
-
NM_001351960.2 → NP_001338889.1 histone H4 transcription factor isoform 1
Status: REVIEWED
- Description
- Transcript Variant: This variant (7), as well as variants 1, 2, 5, and 6, encodes isoform 1.
- Source sequence(s)
-
AP002956, AP003391
- Consensus CDS
-
CCDS8414.1
- UniProtKB/Swiss-Prot
- B3KPH6, B4DWB4, E9PQF4, Q96E65, Q9BQA5, Q9Y4M7
- Conserved Domains (2) summary
-
- COG5236
Location:171 → 303
- COG5236; Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]
- sd00017
Location:286 → 306
- ZF_C2H2; C2H2 Zn finger [structural motif]
-
NM_001351961.2 → NP_001338890.1 histone H4 transcription factor isoform 4
Status: REVIEWED
- Description
- Transcript Variant: This variant (8), as well as variant 9, encodes isoform 4.
- Source sequence(s)
-
AP002956, AP003391
- Conserved Domains (2) summary
-
- COG5236
Location:171 → 303
- COG5236; Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]
- sd00017
Location:286 → 306
- ZF_C2H2; C2H2 Zn finger [structural motif]
-
NM_001351962.2 → NP_001338891.1 histone H4 transcription factor isoform 4
Status: REVIEWED
- Description
- Transcript Variant: This variant (9), as well as variant 8, encodes isoform 4.
- Source sequence(s)
-
AP002956, AP003391
- Conserved Domains (2) summary
-
- COG5236
Location:171 → 303
- COG5236; Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]
- sd00017
Location:286 → 306
- ZF_C2H2; C2H2 Zn finger [structural motif]
-
NM_001351963.2 → NP_001338892.1 histone H4 transcription factor isoform 5
Status: REVIEWED
- Description
- Transcript Variant: This variant (10), as well as variant 11, encodes isoform 5.
- Source sequence(s)
-
AP002956, AP003391
- Conserved Domains (2) summary
-
- COG5236
Location:22 → 97
- COG5236; Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]
- sd00017
Location:80 → 100
- ZF_C2H2; C2H2 Zn finger [structural motif]
-
NM_001351964.2 → NP_001338893.1 histone H4 transcription factor isoform 5
Status: REVIEWED
- Description
- Transcript Variant: This variant (11), as well as variant 10, encodes isoform 5.
- Source sequence(s)
-
AP002956, AP003391
- Conserved Domains (2) summary
-
- COG5236
Location:22 → 97
- COG5236; Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]
- sd00017
Location:80 → 100
- ZF_C2H2; C2H2 Zn finger [structural motif]
-
NM_001351965.2 → NP_001338894.1 histone H4 transcription factor isoform 6
Status: REVIEWED
- Description
- Transcript Variant: This variant (12), as well as variants 13, 14, 15, 16, and 17, encodes isoform 6.
- Source sequence(s)
-
AP002956, AP003391
- Conserved Domains (2) summary
-
- sd00017
Location:39 → 59
- ZF_C2H2; C2H2 Zn finger [structural motif]
- sd00019
Location:10 → 31
- ZF_C2H2; C2H2 Zn finger [structural motif]
-
NM_001351966.2 → NP_001338895.1 histone H4 transcription factor isoform 6
Status: REVIEWED
- Description
- Transcript Variant: This variant (13), as well as variants 12, 14, 15, 16, and 17, encodes isoform 6.
- Source sequence(s)
-
AP002956, AP003391
- Conserved Domains (2) summary
-
- sd00017
Location:39 → 59
- ZF_C2H2; C2H2 Zn finger [structural motif]
- sd00019
Location:10 → 31
- ZF_C2H2; C2H2 Zn finger [structural motif]
-
NM_001351969.2 → NP_001338898.1 histone H4 transcription factor isoform 6
Status: REVIEWED
- Description
- Transcript Variant: This variant (14), as well as variants 12, 13, 15, 16, and 17, encodes isoform 6.
- Source sequence(s)
-
AP002956, AP003391
- Conserved Domains (2) summary
-
- sd00017
Location:39 → 59
- ZF_C2H2; C2H2 Zn finger [structural motif]
- sd00019
Location:10 → 31
- ZF_C2H2; C2H2 Zn finger [structural motif]
-
NM_001351971.2 → NP_001338900.1 histone H4 transcription factor isoform 6
Status: REVIEWED
- Description
- Transcript Variant: This variant (15), as well as variants 12, 13, 14, 16, and 17, encodes isoform 6.
- Source sequence(s)
-
AP002956, AP003391
- Conserved Domains (2) summary
-
- sd00017
Location:39 → 59
- ZF_C2H2; C2H2 Zn finger [structural motif]
- sd00019
Location:10 → 31
- ZF_C2H2; C2H2 Zn finger [structural motif]
-
NM_001351972.2 → NP_001338901.1 histone H4 transcription factor isoform 6
Status: REVIEWED
- Description
- Transcript Variant: This variant (16), as well as variants 12, 13, 14, 15, and 17, encodes isoform 6.
- Source sequence(s)
-
AP002956, AP003391
- Conserved Domains (2) summary
-
- sd00017
Location:39 → 59
- ZF_C2H2; C2H2 Zn finger [structural motif]
- sd00019
Location:10 → 31
- ZF_C2H2; C2H2 Zn finger [structural motif]
-
NM_001351974.2 → NP_001338903.1 histone H4 transcription factor isoform 6
Status: REVIEWED
- Description
- Transcript Variant: This variant (17), as well as variants 12, 13, 14, 15, and 16, encodes isoform 6.
- Source sequence(s)
-
AP002956, AP003391
- Conserved Domains (2) summary
-
- sd00017
Location:39 → 59
- ZF_C2H2; C2H2 Zn finger [structural motif]
- sd00019
Location:10 → 31
- ZF_C2H2; C2H2 Zn finger [structural motif]
-
NM_015517.5 → NP_056332.2 histone H4 transcription factor isoform 1
See identical proteins and their annotated locations for NP_056332.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (1), as well as variants 2, 5, 6, and 7, encodes isoform 1.
- Source sequence(s)
-
AP002956, AP003391
- Consensus CDS
-
CCDS8414.1
- UniProtKB/Swiss-Prot
- B3KPH6, B4DWB4, E9PQF4, Q96E65, Q9BQA5, Q9Y4M7
- Conserved Domains (2) summary
-
- COG5236
Location:171 → 303
- COG5236; Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]
- sd00017
Location:286 → 306
- ZF_C2H2; C2H2 Zn finger [structural motif]
-
NM_198971.3 → NP_945322.1 histone H4 transcription factor isoform 1
See identical proteins and their annotated locations for NP_945322.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2), as well as variants 1, 5, 6, and 7, encodes isoform 1.
- Source sequence(s)
-
AP002956, AP003391
- Consensus CDS
-
CCDS8414.1
- UniProtKB/Swiss-Prot
- B3KPH6, B4DWB4, E9PQF4, Q96E65, Q9BQA5, Q9Y4M7
- Related
- ENSP00000318085.3, ENST00000350777.7
- Conserved Domains (2) summary
-
- COG5236
Location:171 → 303
- COG5236; Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]
- sd00017
Location:286 → 306
- ZF_C2H2; C2H2 Zn finger [structural motif]
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000011.10 Reference GRCh38.p14 Primary Assembly
- Range
-
119121580..119136059
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_011542744.3 → XP_011541046.1 histone H4 transcription factor isoform X1
- Conserved Domains (2) summary
-
- COG5236
Location:185 → 317
- COG5236; Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]
- sd00017
Location:300 → 320
- ZF_C2H2; C2H2 Zn finger [structural motif]
-
XM_017017499.2 → XP_016872988.1 histone H4 transcription factor isoform X2
Alternate T2T-CHM13v2.0
Genomic
-
NC_060935.1 Alternate T2T-CHM13v2.0
- Range
-
119141956..119156439
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054368356.1 → XP_054224331.1 histone H4 transcription factor isoform X1
-
XM_054368357.1 → XP_054224332.1 histone H4 transcription factor isoform X2