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    MELTF-AS1 MELTF antisense RNA 1 [ Homo sapiens (human) ]

    Gene ID: 100507057, updated on 17-Sep-2024

    Summary

    Official Symbol
    MELTF-AS1provided by HGNC
    Official Full Name
    MELTF antisense RNA 1provided by HGNC
    Primary source
    HGNC:HGNC:40373
    See related
    Ensembl:ENSG00000228109 AllianceGenome:HGNC:40373
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    PLANE; MFI2-AS1
    Expression
    Broad expression in kidney (RPKM 7.2), testis (RPKM 6.9) and 24 other tissues See more
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    Genomic context

    See MELTF-AS1 in Genome Data Viewer
    Location:
    3q29
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (197002906..197004744)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (199729089..199730933)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (196729777..196731615)

    Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein SA-like Neighboring gene Sharpr-MPRA regulatory region 2091 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15080 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15081 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15082 Neighboring gene ribosomal protein SA pseudogene 30 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21107 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:196756444-196757080 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15084 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15083 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:196757081-196757717 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr3:196758105-196759304 Neighboring gene melanotransferrin Neighboring gene MPRA-validated peak4992 silencer Neighboring gene discs large MAGUK scaffold protein 1 Neighboring gene ReSE screen-validated silencer GRCh37_chr3:196860144-196860342 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr3:196930580-196931118 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15086 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15087 Neighboring gene DLG1 antisense RNA 1 Neighboring gene microRNA 4797

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    General gene information

    Markers

    Other Names

    • MFI2 antisense RNA 1 (non-protein coding)
    • Pan-cancer LncRNA Activating NCOR2 responsive to E2F1

    Clone Names

    • AC068302.3

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_038285.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC068302, BC032042
      Related
      ENST00000415244.1

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

      Range
      197002906..197004744
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060927.1 Alternate T2T-CHM13v2.0

      Range
      199729089..199730933
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)