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    PPY2P pancreatic polypeptide 2, pseudogene [ Homo sapiens (human) ]

    Gene ID: 23614, updated on 26-Oct-2024

    Summary

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    Official Symbol
    PPY2Pprovided by HGNC
    Official Full Name
    pancreatic polypeptide 2, pseudogeneprovided by HGNC
    Primary source
    HGNC:HGNC:9328
    See related
    MIM:606638; AllianceGenome:HGNC:9328
    Gene type
    pseudo
    RefSeq status
    PROVISIONAL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    PPY2
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    See PPY2P in Genome Data Viewer
    Location:
    17q11.2
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 17 NC_000017.11 (28247444..28248289)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 17 NC_060941.1 (29189288..29190133)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (26574470..26575315)

    Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene nemo like kinase Neighboring gene uncharacterized LOC105371711 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 11919 Neighboring gene uncharacterized LOC105371710 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:26553198-26553848 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:26554499-26555148 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:26555149-26555798 Neighboring gene Sharpr-MPRA regulatory region 13006 Neighboring gene uncharacterized LOC105371712 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 8334 Neighboring gene peptide YY 2 (pseudogene) Neighboring gene leucine-rich repeat-containing protein 37A3 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr17:26591629-26592828 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr17:26594224-26595423 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr17:26609113-26610312 Neighboring gene keratin 18 pseudogene 55

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

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    Related articles in PubMed

    1. The origin and evolution of peptide YY (PYY) and pancreatic polypeptide (PP). Conlon JM. Peptides, 2002 Feb. PMID 11825642
    2. Peptide YY-2 (PYY2) and pancreatic polypeptide-2 (PPY2): species-specific evolution of novel members of the neuropeptide Y gene family. Couzens M, et al. Genomics, 2000 Mar 15. PMID 10756099

    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    Genotypes

    General gene information

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    Markers

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_002181.1 RNA Sequence

      Status: PROVISIONAL

      Source sequence(s)
      AF222903

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000017.11 Reference GRCh38.p14 Primary Assembly

      Range
      28247444..28248289
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060941.1 Alternate T2T-CHM13v2.0

      Range
      29189288..29190133
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_021092.1: Suppressed sequence

      Description
      NM_021092.1: This RefSeq record was removed by NCBI staff. Contact info@ncbi.nlm.nih.gov for further information.
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9NRI7.1 GenPept UniProtKB/Swiss-Prot:Q9NRI7

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.