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    MIR551B microRNA 551b [ Homo sapiens (human) ]

    Gene ID: 693136, updated on 5-Feb-2024

    Summary

    Official Symbol
    MIR551Bprovided by HGNC
    Official Full Name
    microRNA 551bprovided by HGNC
    Primary source
    HGNC:HGNC:32807
    See related
    Ensembl:ENSG00000207717 miRBase:MI0003575; AllianceGenome:HGNC:32807
    Gene type
    ncRNA
    RefSeq status
    PROVISIONAL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    MIRN551B; mir-551b
    Summary
    microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]
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    Genomic context

    See MIR551B in Genome Data Viewer
    Location:
    3q26.2
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (168551854..168551949)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (171335794..171335889)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (168269642..168269737)

    Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:167729036-167729547 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20773 Neighboring gene golgi integral membrane protein 4 Neighboring gene NANOG hESC enhancer GRCh37_chr3:167799674-167800287 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14868 Neighboring gene H3K27ac hESC enhancer GRCh37_chr3:167813739-167814240 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20774 Neighboring gene CRISPRi-validated cis-regulatory element chr3.4789 Neighboring gene Sharpr-MPRA regulatory region 6960 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20775 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20776 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20777 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14871 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14870 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr3:167990063-167990598 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20778 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20779 Neighboring gene NANOG hESC enhancer GRCh37_chr3:167993395-167993896 Neighboring gene EGF like and EMI domain containing 1, pseudogene Neighboring gene H3K27ac hESC enhancer GRCh37_chr3:168102881-168103380 Neighboring gene MPRA-validated peak4911 silencer Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr3:168231986-168232502 Neighboring gene RNA, U2 small nuclear 20, pseudogene Neighboring gene uncharacterized LOC105374200 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:168334872-168335488 Neighboring gene ribosomal protein SA pseudogene 33

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    General gene information

    Other Names

    • hsa-mir-551b

    Gene Ontology Provided by GOA

    Process Evidence Code Pubs
    involved_in miRNA-mediated post-transcriptional gene silencing IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    part_of RISC complex IEA
    Inferred from Electronic Annotation
    more info
     

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_030294.1 RNA Sequence

      Status: PROVISIONAL

      Source sequence(s)
      AC018356
      Related
      ENST00000384984.1

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

      Range
      168551854..168551949
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060927.1 Alternate T2T-CHM13v2.0

      Range
      171335794..171335889
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)