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    LOC100192426 uncharacterized LOC100192426 [ Homo sapiens (human) ]

    Gene ID: 100192426, updated on 26-Oct-2024

    Summary

    Gene symbol
    LOC100192426
    Gene description
    uncharacterized LOC100192426
    Gene type
    ncRNA
    RefSeq status
    PREDICTED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

    See LOC100192426 in Genome Data Viewer
    Location:
    18p11.23
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 18 NC_000018.10 (8360820..8367034, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 18 NC_060942.1 (8523969..8530184, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 18 NC_000018.9 (8360818..8367032, complement)

    Chromosome 18 - NC_000018.10Genomic Context describing neighboring genes Neighboring gene protein tyrosine phosphatase receptor type M Neighboring gene small nucleolar RNA U3 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr18:8045403-8046602 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr18:8062594-8063198 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr18:8066484-8067132 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr18:8084054-8084920 Neighboring gene NANOG hESC enhancer GRCh37_chr18:8088787-8089335 Neighboring gene uncharacterized LOC107985119 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr18:8141627-8142826 Neighboring gene Sharpr-MPRA regulatory region 9307 Neighboring gene NANOG hESC enhancer GRCh37_chr18:8187471-8187972 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr18:8232624-8233446 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr18:8296475-8297674 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr18:8367345-8367845 Neighboring gene uncharacterized LOC124904241 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr18:8401222-8401752 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr18:8406579-8407223 Neighboring gene COP1 pseudogene 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_024419.1 RNA Sequence

      Status: PREDICTED

      Source sequence(s)
      AI184987, AP001094, BX115569

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000018.10 Reference GRCh38.p14 Primary Assembly

      Range
      8360820..8367034 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060942.1 Alternate T2T-CHM13v2.0

      Range
      8523969..8530184 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)