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    EIF1B-AS1 EIF1B antisense RNA 1 [ Homo sapiens (human) ]

    Gene ID: 440952, updated on 17-Sep-2024

    Summary

    Official Symbol
    EIF1B-AS1provided by HGNC
    Official Full Name
    EIF1B antisense RNA 1provided by HGNC
    Primary source
    HGNC:HGNC:44555
    See related
    Ensembl:ENSG00000280739 AllianceGenome:HGNC:44555
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

    See EIF1B-AS1 in Genome Data Viewer
    Location:
    3p22.1
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (40173145..40309698, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (40187067..40324746, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (40214636..40351189, complement)

    Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene myosin VIIA and Rab interacting protein Neighboring gene RNA, U4 small nuclear 56, pseudogene Neighboring gene NANOG hESC enhancer GRCh37_chr3:40063846-40064360 Neighboring gene uncharacterized LOC124909367 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr3:40175064-40176263 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19709 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19710 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19711 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19712 Neighboring gene RNA, 7SL, cytoplasmic 411, pseudogene Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19713 Neighboring gene small nucleolar RNA SNORA64/SNORA10 family Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:40332291-40332837 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr3:40342216-40343415 Neighboring gene uncharacterized LOC124906228 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19714 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14230 Neighboring gene Sharpr-MPRA regulatory region 12551 Neighboring gene phosphoglycerate mutase 1 pseudogene 3 Neighboring gene eukaryotic translation initiation factor 1B

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    General gene information

    Markers

    Clone Names

    • FLJ33065

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_033965.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC099557, AC104186, AK309874, BC045736
      Related
      ENST00000625390.2

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

      Range
      40173145..40309698 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060927.1 Alternate T2T-CHM13v2.0

      Range
      40187067..40324746 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)