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    QKILA QKI interacting lncRNA [ Homo sapiens (human) ]

    Gene ID: 101927490, updated on 17-Sep-2024

    Summary

    Official Symbol
    QKILAprovided by HGNC
    Official Full Name
    QKI interacting lncRNAprovided by HGNC
    Primary source
    HGNC:HGNC:55255
    See related
    Ensembl:ENSG00000261268 AllianceGenome:HGNC:55255
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

    See QKILA in Genome Data Viewer
    Location:
    4q31.1
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (139618136..139623254, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (142937730..142942845, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (140539290..140544408, complement)

    Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105377451 Neighboring gene uncharacterized LOC105377622 Neighboring gene Sharpr-MPRA regulatory region 6908 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr4:140586532-140587731 Neighboring gene microsomal glutathione S-transferase 2 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21929 Neighboring gene RN7SK pseudogene 237 Neighboring gene H3 histone pseudogene 16

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_187398.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC112236
      Related
      ENST00000561977.2

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

      Range
      139618136..139623254 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060928.1 Alternate T2T-CHM13v2.0

      Range
      142937730..142942845 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)