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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001307980.1 → NP_001294909.1 dnaJ homolog subfamily C member 4 isoform 1
See identical proteins and their annotated locations for NP_001294909.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (1).
- Source sequence(s)
-
AF036874, AP001453, BC032137, BC044584
- Consensus CDS
-
CCDS76424.1
- UniProtKB/TrEMBL
- J3KNJ8, Q86VG4
- Related
- ENSP00000320548.5, ENST00000321460.5
- Conserved Domains (1) summary
-
- pfam00226
Location:34 → 96
- DnaJ; DnaJ domain
-
NM_001307981.1 → NP_001294910.1 dnaJ homolog subfamily C member 4 isoform 2
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) uses an alternate in-frame splice site at an internal exon. It encodes isoform 2, which is shorter than isoform 1.
- Source sequence(s)
-
AP001453, BC044584, BC051008
- UniProtKB/TrEMBL
-
Q86VG4
- Conserved Domains (1) summary
-
- pfam00226
Location:34 → 96
- DnaJ; DnaJ domain
-
NM_005528.4 → NP_005519.2 dnaJ homolog subfamily C member 4 isoform 3
See identical proteins and their annotated locations for NP_005519.2
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) differs in the 5' and 3' UTRs and uses alternate splice sites in the 3' coding region, resulting in a frameshift and novel 3' coding region compared to variant 1. It encodes isoform 3, which is shorter than and has a distinct C-terminus compared to isoform 1.
- Source sequence(s)
-
BC053947
- Consensus CDS
-
CCDS41666.1
- UniProtKB/Swiss-Prot
- O14716, Q9NNZ3
- Related
- ENSP00000486499.2, ENST00000628077.3
- Conserved Domains (1) summary
-
- pfam00226
Location:34 → 96
- DnaJ; DnaJ domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000011.10 Reference GRCh38.p14 Primary Assembly
- Range
-
64230432..64234281
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047426865.1 → XP_047282821.1 dnaJ homolog subfamily C member 4 isoform X1
Alternate T2T-CHM13v2.0
Genomic
-
NC_060935.1 Alternate T2T-CHM13v2.0
- Range
-
64220128..64224226
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054368615.1 → XP_054224590.1 dnaJ homolog subfamily C member 4 isoform X2
-
XM_054368617.1 → XP_054224592.1 dnaJ homolog subfamily C member 4 isoform X3
- UniProtKB/Swiss-Prot
- O14716, Q9NNZ3
-
XM_054368616.1 → XP_054224591.1 dnaJ homolog subfamily C member 4 isoform X1