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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_033004.2 RefSeqGene
- Range
-
26284..31729
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001029896.2 → NP_001025067.1 WD repeat domain phosphoinositide-interacting protein 4 isoform 2
See identical proteins and their annotated locations for NP_001025067.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) has an alternate 5' UTR and lacks a 3-nt segment in the CDS, as compared to variant 1. The encoded isoform 2 thus lacks an internal amino acid, as compared to isoform 1.
- Source sequence(s)
-
AJ005897, BC035979, BQ068083
- Consensus CDS
-
CCDS35250.1
- UniProtKB/Swiss-Prot
- A6NGH5, B7WPI2, Q5MNZ5, Q6IBS7, Q6NT94, Q96H03, Q9Y484
- UniProtKB/TrEMBL
-
A0A0U1RR06
- Related
- ENSP00000365551.3, ENST00000376372.9
- Conserved Domains (2) summary
-
- sd00039
Location:196 → 232
- 7WD40; WD40 repeat [structural motif]
- cl29593
Location:187 → 274
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
NM_007075.4 → NP_009006.2 WD repeat domain phosphoinositide-interacting protein 4 isoform 1
See identical proteins and their annotated locations for NP_009006.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents a longer transcript and encodes a longer isoform (1).
- Source sequence(s)
-
AC231657, AF196779, BC035979, BC069206
- Consensus CDS
-
CCDS14318.1
- UniProtKB/TrEMBL
-
A0A0U1RR06
- Related
- ENSP00000348848.3, ENST00000356463.7
- Conserved Domains (2) summary
-
- sd00039
Location:197 → 233
- 7WD40; WD40 repeat [structural motif]
- cl29593
Location:8 → 265
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000023.11 Reference GRCh38.p14 Primary Assembly
- Range
-
49074442..49101178 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Reference GRCh38.p14 PATCHES
Genomic
-
NW_025791820.1 Reference GRCh38.p14 PATCHES
- Range
-
233393..260129 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate T2T-CHM13v2.0
Genomic
-
NC_060947.1 Alternate T2T-CHM13v2.0
- Range
-
48486169..48512926 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)