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    AP2/B3-like transcriptional factor family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 819790, updated on 18-Sep-2024

    Summary

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    Official Full Name
    AP2/B3-like transcriptional factor family protein
    Primary source
    TAIR:AT3G06160
    Locus tag
    AT3G06160
    See related
    Araport:AT3G06160
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F28L1.10; F28L1_10
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    7
    Sequence:
    Chromosome: 3; NC_003074.8 (1864273..1867415)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene RING/U-box superfamily protein Neighboring gene RING zinc finger protein Neighboring gene cytochrome P450 family protein Neighboring gene Serinc-domain containing serine and sphingolipid biosynthesis protein Neighboring gene Ribosomal protein L34e superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001337634.1
    NM_001337635.1
    NM_001337636.1
    NM_111491.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    AP2/B3-like transcriptional factor family protein
    NP_001189823.1
    • AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT3G06220.1).
    NP_187267.1
    • AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT3G06220.1); Has 400 Blast hits to 363 proteins in 15 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 378; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      1864273..1867415
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001202894.2 → NP_001189823.1  AP2/B3-like transcriptional factor family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001189823.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V910, F4J9Q0
      Conserved Domains (1) summary
      smart01019
      Location:69 → 159
      B3; B3 DNA binding domain

    2. NM_111491.1 → NP_187267.1  AP2/B3-like transcriptional factor family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_187267.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9M8K2
      UniProtKB/TrEMBL
      A0A5S9XAQ4
      Conserved Domains (1) summary
      smart01019
      Location:25 → 115
      B3; B3 DNA binding domain

    3. NM_001337634.1 → NP_001327925.1  AP2/B3-like transcriptional factor family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LTU1, A0A5S9XAQ4
      Conserved Domains (1) summary
      smart01019
      Location:10 → 100
      B3; B3 DNA binding domain

    4. NM_001337635.1 → NP_001327927.1  AP2/B3-like transcriptional factor family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LTU1, A0A5S9XAQ4
      Conserved Domains (1) summary
      smart01019
      Location:10 → 100
      B3; B3 DNA binding domain

    5. NM_001337636.1 → NP_001327926.1  AP2/B3-like transcriptional factor family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LTU1, A0A5S9XAQ4
      Conserved Domains (1) summary
      smart01019
      Location:10 → 100
      B3; B3 DNA binding domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9M8K2.1

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