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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_021274.1 RefSeqGene
- Range
-
27496..80390
- Download
- GenBank, FASTA, Sequence Viewer (Graphics), LRG_628
mRNA and Protein(s)
-
NM_001184772.3 → NP_001171701.1 BCL-6 corepressor-like protein 1 isoform 1a
See identical proteins and their annotated locations for NP_001171701.1
Status: REVIEWED
- Source sequence(s)
-
AL034405, AL136450, KF459400, Z82208
- Consensus CDS
-
CCDS94663.1
- UniProtKB/Swiss-Prot
- B5MDQ8, Q5H9F2, Q5H9F3, Q5H9F4, Q6ZVE0, Q8TEN3, Q9Y528
- Conserved Domains (4) summary
-
- PHA03247
Location:198 → 636
- PHA03247; large tegument protein UL36; Provisional
- cd14260
Location:1666 → 1779
- PUFD_like_1; PCGF Ub-like fold discriminator of BCOR-like 1
- sd00045
Location:1496 → 1527
- ANK; ANK repeat [structural motif]
- pfam12796
Location:1500 → 1591
- Ank_2; Ankyrin repeats (3 copies)
-
NM_001379450.1 → NP_001366379.1 BCL-6 corepressor-like protein 1 isoform 1a
Status: REVIEWED
- Source sequence(s)
-
AL034405, AL136450, KF459400, Z82208
- Consensus CDS
-
CCDS94663.1
- UniProtKB/Swiss-Prot
- B5MDQ8, Q5H9F2, Q5H9F3, Q5H9F4, Q6ZVE0, Q8TEN3, Q9Y528
- Conserved Domains (4) summary
-
- PHA03247
Location:198 → 636
- PHA03247; large tegument protein UL36; Provisional
- cd14260
Location:1666 → 1779
- PUFD_like_1; PCGF Ub-like fold discriminator of BCOR-like 1
- sd00045
Location:1496 → 1527
- ANK; ANK repeat [structural motif]
- pfam12796
Location:1500 → 1591
- Ank_2; Ankyrin repeats (3 copies)
-
NM_001379451.1 → NP_001366380.1 BCL-6 corepressor-like protein 1 isoform 1a
Status: REVIEWED
- Source sequence(s)
-
AL034405, AL136450, KF459400, Z82208
- Consensus CDS
-
CCDS94663.1
- UniProtKB/Swiss-Prot
- B5MDQ8, Q5H9F2, Q5H9F3, Q5H9F4, Q6ZVE0, Q8TEN3, Q9Y528
- Related
- ENSP00000437775.2, ENST00000540052.6
- Conserved Domains (4) summary
-
- PHA03247
Location:198 → 636
- PHA03247; large tegument protein UL36; Provisional
- cd14260
Location:1666 → 1779
- PUFD_like_1; PCGF Ub-like fold discriminator of BCOR-like 1
- sd00045
Location:1496 → 1527
- ANK; ANK repeat [structural motif]
- pfam12796
Location:1500 → 1591
- Ank_2; Ankyrin repeats (3 copies)
-
NM_021946.5 → NP_068765.3 BCL-6 corepressor-like protein 1 isoform 1
Status: REVIEWED
- Source sequence(s)
-
AL034405, AL136450, KF459400, Z82208
- Consensus CDS
-
CCDS14616.1
- UniProtKB/Swiss-Prot
-
Q5H9F3
- Related
- ENSP00000218147.7, ENST00000218147.11
- Conserved Domains (4) summary
-
- cd00204
Location:1426 → 1530
- ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
- cd14260
Location:1592 → 1705
- PUFD_like_1; PCGF Ub-like fold discriminator of BCOR-like 1
- pfam12796
Location:1426 → 1517
- Ank_2; Ankyrin repeats (3 copies)
- sd00045
Location:1455 → 1486
- ANK; ANK repeat [structural motif]
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000023.11 Reference GRCh38.p14 Primary Assembly
- Range
-
129980313..130058071
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_005262453.5 → XP_005262510.2 BCL-6 corepressor-like protein 1 isoform X1
See identical proteins and their annotated locations for XP_005262510.2
- UniProtKB/Swiss-Prot
- B5MDQ8, Q5H9F2, Q5H9F3, Q5H9F4, Q6ZVE0, Q8TEN3, Q9Y528
- Conserved Domains (4) summary
-
- PHA03247
Location:198 → 636
- PHA03247; large tegument protein UL36; Provisional
- cd14260
Location:1666 → 1779
- PUFD_like_1; PCGF Ub-like fold discriminator of BCOR-like 1
- sd00045
Location:1496 → 1527
- ANK; ANK repeat [structural motif]
- pfam12796
Location:1500 → 1591
- Ank_2; Ankyrin repeats (3 copies)
-
XM_006724777.4 → XP_006724840.1 BCL-6 corepressor-like protein 1 isoform X1
See identical proteins and their annotated locations for XP_006724840.1
- UniProtKB/Swiss-Prot
- B5MDQ8, Q5H9F2, Q5H9F3, Q5H9F4, Q6ZVE0, Q8TEN3, Q9Y528
- Conserved Domains (4) summary
-
- PHA03247
Location:198 → 636
- PHA03247; large tegument protein UL36; Provisional
- cd14260
Location:1666 → 1779
- PUFD_like_1; PCGF Ub-like fold discriminator of BCOR-like 1
- sd00045
Location:1496 → 1527
- ANK; ANK repeat [structural motif]
- pfam12796
Location:1500 → 1591
- Ank_2; Ankyrin repeats (3 copies)
-
XM_047442344.1 → XP_047298300.1 BCL-6 corepressor-like protein 1 isoform X2
-
XM_017029721.2 → XP_016885210.1 BCL-6 corepressor-like protein 1 isoform X1
- UniProtKB/Swiss-Prot
- B5MDQ8, Q5H9F2, Q5H9F3, Q5H9F4, Q6ZVE0, Q8TEN3, Q9Y528
- Conserved Domains (4) summary
-
- PHA03247
Location:198 → 636
- PHA03247; large tegument protein UL36; Provisional
- cd14260
Location:1666 → 1779
- PUFD_like_1; PCGF Ub-like fold discriminator of BCOR-like 1
- sd00045
Location:1496 → 1527
- ANK; ANK repeat [structural motif]
- pfam12796
Location:1500 → 1591
- Ank_2; Ankyrin repeats (3 copies)
-
XM_047442341.1 → XP_047298297.1 BCL-6 corepressor-like protein 1 isoform X1
- UniProtKB/Swiss-Prot
- B5MDQ8, Q5H9F2, Q5H9F3, Q5H9F4, Q6ZVE0, Q8TEN3, Q9Y528
-
XM_047442340.1 → XP_047298296.1 BCL-6 corepressor-like protein 1 isoform X1
- UniProtKB/Swiss-Prot
- B5MDQ8, Q5H9F2, Q5H9F3, Q5H9F4, Q6ZVE0, Q8TEN3, Q9Y528
-
XM_005262456.5 → XP_005262513.2 BCL-6 corepressor-like protein 1 isoform X2
- Conserved Domains (5) summary
-
- cd00204
Location:1360 → 1474
- ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
- cd14260
Location:1536 → 1649
- PUFD_like_1; PCGF Ub-like fold discriminator of BCOR-like 1
- pfam12796
Location:1370 → 1461
- Ank_2; Ankyrin repeats (3 copies)
- pfam15808
Location:1184 → 1297
- BCOR; BCL-6 co-repressor, non-ankyrin-repeat region
- sd00045
Location:1366 → 1397
- ANK; ANK repeat [structural motif]
-
XM_047442345.1 → XP_047298301.1 BCL-6 corepressor-like protein 1 isoform X2
-
XM_006724776.4 → XP_006724839.1 BCL-6 corepressor-like protein 1 isoform X1
See identical proteins and their annotated locations for XP_006724839.1
- UniProtKB/Swiss-Prot
- B5MDQ8, Q5H9F2, Q5H9F3, Q5H9F4, Q6ZVE0, Q8TEN3, Q9Y528
- Conserved Domains (4) summary
-
- PHA03247
Location:198 → 636
- PHA03247; large tegument protein UL36; Provisional
- cd14260
Location:1666 → 1779
- PUFD_like_1; PCGF Ub-like fold discriminator of BCOR-like 1
- sd00045
Location:1496 → 1527
- ANK; ANK repeat [structural motif]
- pfam12796
Location:1500 → 1591
- Ank_2; Ankyrin repeats (3 copies)
-
XM_047442343.1 → XP_047298299.1 BCL-6 corepressor-like protein 1 isoform X2
-
XM_047442342.1 → XP_047298298.1 BCL-6 corepressor-like protein 1 isoform X2
-
XM_005262455.5 → XP_005262512.2 BCL-6 corepressor-like protein 1 isoform X1
See identical proteins and their annotated locations for XP_005262512.2
- UniProtKB/Swiss-Prot
- B5MDQ8, Q5H9F2, Q5H9F3, Q5H9F4, Q6ZVE0, Q8TEN3, Q9Y528
- Conserved Domains (4) summary
-
- PHA03247
Location:198 → 636
- PHA03247; large tegument protein UL36; Provisional
- cd14260
Location:1666 → 1779
- PUFD_like_1; PCGF Ub-like fold discriminator of BCOR-like 1
- sd00045
Location:1496 → 1527
- ANK; ANK repeat [structural motif]
- pfam12796
Location:1500 → 1591
- Ank_2; Ankyrin repeats (3 copies)
-
XM_047442339.1 → XP_047298295.1 BCL-6 corepressor-like protein 1 isoform X1
- UniProtKB/Swiss-Prot
- B5MDQ8, Q5H9F2, Q5H9F3, Q5H9F4, Q6ZVE0, Q8TEN3, Q9Y528
-
XM_017029722.2 → XP_016885211.1 BCL-6 corepressor-like protein 1 isoform X1
- UniProtKB/Swiss-Prot
- B5MDQ8, Q5H9F2, Q5H9F3, Q5H9F4, Q6ZVE0, Q8TEN3, Q9Y528
- Conserved Domains (4) summary
-
- PHA03247
Location:198 → 636
- PHA03247; large tegument protein UL36; Provisional
- cd14260
Location:1666 → 1779
- PUFD_like_1; PCGF Ub-like fold discriminator of BCOR-like 1
- sd00045
Location:1496 → 1527
- ANK; ANK repeat [structural motif]
- pfam12796
Location:1500 → 1591
- Ank_2; Ankyrin repeats (3 copies)
-
XM_047442347.1 → XP_047298303.1 BCL-6 corepressor-like protein 1 isoform X4
-
XM_047442346.1 → XP_047298302.1 BCL-6 corepressor-like protein 1 isoform X3
Alternate T2T-CHM13v2.0
Genomic
-
NC_060947.1 Alternate T2T-CHM13v2.0
- Range
-
128299075..128376871
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054327551.1 → XP_054183526.1 BCL-6 corepressor-like protein 1 isoform X2
-
XM_054327544.1 → XP_054183519.1 BCL-6 corepressor-like protein 1 isoform X1
- UniProtKB/Swiss-Prot
- B5MDQ8, Q5H9F2, Q5H9F3, Q5H9F4, Q6ZVE0, Q8TEN3, Q9Y528
-
XM_054327548.1 → XP_054183523.1 BCL-6 corepressor-like protein 1 isoform X1
- UniProtKB/Swiss-Prot
- B5MDQ8, Q5H9F2, Q5H9F3, Q5H9F4, Q6ZVE0, Q8TEN3, Q9Y528
-
XM_054327553.1 → XP_054183528.1 BCL-6 corepressor-like protein 1 isoform X2
-
XM_054327543.1 → XP_054183518.1 BCL-6 corepressor-like protein 1 isoform X1
- UniProtKB/Swiss-Prot
- B5MDQ8, Q5H9F2, Q5H9F3, Q5H9F4, Q6ZVE0, Q8TEN3, Q9Y528
-
XM_054327545.1 → XP_054183520.1 BCL-6 corepressor-like protein 1 isoform X1
- UniProtKB/Swiss-Prot
- B5MDQ8, Q5H9F2, Q5H9F3, Q5H9F4, Q6ZVE0, Q8TEN3, Q9Y528
-
XM_054327542.1 → XP_054183517.1 BCL-6 corepressor-like protein 1 isoform X1
- UniProtKB/Swiss-Prot
- B5MDQ8, Q5H9F2, Q5H9F3, Q5H9F4, Q6ZVE0, Q8TEN3, Q9Y528
-
XM_054327549.1 → XP_054183524.1 BCL-6 corepressor-like protein 1 isoform X2
-
XM_054327546.1 → XP_054183521.1 BCL-6 corepressor-like protein 1 isoform X1
- UniProtKB/Swiss-Prot
- B5MDQ8, Q5H9F2, Q5H9F3, Q5H9F4, Q6ZVE0, Q8TEN3, Q9Y528
-
XM_054327552.1 → XP_054183527.1 BCL-6 corepressor-like protein 1 isoform X2
-
XM_054327550.1 → XP_054183525.1 BCL-6 corepressor-like protein 1 isoform X2
-
XM_054327540.1 → XP_054183515.1 BCL-6 corepressor-like protein 1 isoform X1
- UniProtKB/Swiss-Prot
- B5MDQ8, Q5H9F2, Q5H9F3, Q5H9F4, Q6ZVE0, Q8TEN3, Q9Y528
-
XM_054327541.1 → XP_054183516.1 BCL-6 corepressor-like protein 1 isoform X1
- UniProtKB/Swiss-Prot
- B5MDQ8, Q5H9F2, Q5H9F3, Q5H9F4, Q6ZVE0, Q8TEN3, Q9Y528
-
XM_054327547.1 → XP_054183522.1 BCL-6 corepressor-like protein 1 isoform X1
- UniProtKB/Swiss-Prot
- B5MDQ8, Q5H9F2, Q5H9F3, Q5H9F4, Q6ZVE0, Q8TEN3, Q9Y528
-
XM_054327555.1 → XP_054183530.1 BCL-6 corepressor-like protein 1 isoform X4
-
XM_054327554.1 → XP_054183529.1 BCL-6 corepressor-like protein 1 isoform X3