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    uncharacterized protein [ Saccharomyces cerevisiae S288C ]

    Gene ID: 1466524, updated on 2-Nov-2024

    Summary

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    Official Full Name
    uncharacterized protein
    Primary source
    SGD:S000028829
    Locus tag
    YHL048C-A
    See related
    AllianceGenome:SGD:S000028829; FungiDB:YHL048C-A; VEuPathDB:YHL048C-A
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Located in peroxisome. [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

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    Location:
    chromosome: VIII
    Exon count:
    1
    Sequence:
    Chromosome: VIII; NC_001140.6 (5663..5797, complement)

    Chromosome VIII - NC_001140.6Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Cos8p Neighboring gene siderophore transporter

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001140.6

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Pls1 Is a Peroxisomal Matrix Protein with a Role in Regulating Lysine Biosynthesis. David Y, et al. Cells, 2022 Apr 22. PMID 35563734, Free PMC Article
    2. Parallel identification of new genes in Saccharomyces cerevisiae. Oshiro G, et al. Genome Res, 2002 Aug. PMID 12176929, Free PMC Article
    3. A Comprehensive Membrane Interactome Mapping of Sho1p Reveals Fps1p as a Novel Key Player in the Regulation of the HOG Pathway in S. cerevisiae. Lam MH, et al. J Mol Biol, 2015 Jun 5. PMID 25644660, Free PMC Article
    4. Complete nucleotide sequence of Saccharomyces cerevisiae chromosome VIII. Johnston M, et al. Science, 1994 Sep 30. PMID 8091229
    5. Association of yeast Upf1p with direct substrates of the NMD pathway. Johansson MJ, et al. Proc Natl Acad Sci U S A, 2007 Dec 26. PMID 18087042, Free PMC Article

    See all (10) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in peroxisome HDA PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein
    NP_878084.1
    • hypothetical protein; identified by expression profiling and mass spectrometry; localizes to the peroxisome in a Pex5p-dependent manner in oleate

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001140.6 Reference assembly

      Range
      5663..5797 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001184650.1 → NP_878084.1  TPA: uncharacterized protein YHL048C-A [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_878084.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D3DKS2, Q3E758
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q3E758.1

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