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    TRA-AGC11-1 tRNA-Ala (anticodon AGC) 11-1 [ Homo sapiens (human) ]

    Gene ID: 100009603, updated on 12-Sep-2024

    Summary

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    Official Symbol
    TRA-AGC11-1provided by HGNC
    Official Full Name
    tRNA-Ala (anticodon AGC) 11-1provided by HGNC
    Primary source
    HGNC:HGNC:33253
    See related
    AllianceGenome:HGNC:33253
    Gene type
    tRNA
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    TRNAA2
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    Genomic context

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    See TRA-AGC11-1 in Genome Data Viewer
    Location:
    6p22.2
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (26571864..26571936, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (26440259..26440331, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (26572092..26572164, complement)

    Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene tRNA-Lys (anticodon CTT) 2-4 Neighboring gene uncharacterized LOC105374988 Neighboring gene tRNA-Tyr (anticodon GTA) 1-1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24248 Neighboring gene tRNA-Tyr (anticodon GTA) 8-1 Neighboring gene tRNA-Tyr (anticodon GTA) 3-1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Two human tRNA(Ala) families are recognized by autoantibodies in polymyositis sera. Bunn CC, et al. Mol Biol Med, 1987 Feb. PMID 3613974
    2. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. Chan PP, et al. Nucleic Acids Res, 2009 Jan. PMID 18984615, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See variants in ClinVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    General gene information

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    Markers

    Other Names

    • tRNA-Ala (AGC) 11-1
    • transfer RNA alanine 2 (anticodon AGC)
    • transfer RNA alanine 2 (anticodon UGC)
    • transfer RNA-Ala (AGC) 11-1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

      Range
      26571864..26571936 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCh38.p14 PATCHES

    Genomic

    1. NW_025791780.1 Reference GRCh38.p14 PATCHES

      Range
      118041..118113 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060930.1 Alternate T2T-CHM13v2.0

      Range
      26440259..26440331 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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