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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_011907.2 RefSeqGene
- Range
-
5013..110784
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001382751.1 → NP_001369680.1 probable E3 ubiquitin-protein ligase MID2 isoform 3
Status: REVIEWED
- Source sequence(s)
-
AL034399, AL109946
- Conserved Domains (8) summary
-
- smart00502
Location:219 → 344
- BBC; B-Box C-terminal domain
- cd00063
Location:381 → 511
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- cd13739
Location:516 → 685
- SPRY_PRY_TRIM1; PRY/SPRY domain of tripartite motif-binding protein 1 (TRIM1) or MID2
- cd00162
Location:10 → 59
- RING_Ubox; RING-HC finger (C3HC4-type) [structural motif]
- cd19823
Location:173 → 212
- Bbox2_MID2_C-I; B-box-type 2 zinc finger found in midline-2 (MID2) and similar proteins
- cd19837
Location:115 → 167
- Bbox1_MID2_C-I; B-box-type 1 zinc finger found in midline-2 (MID2) and similar proteins
- pfam18568
Location:323 → 374
- COS; TRIM C-terminal subgroup One Signature domain
- cl17238
Location:10 → 62
- RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain
-
NM_001382752.1 → NP_001369681.1 probable E3 ubiquitin-protein ligase MID2 isoform 4
Status: REVIEWED
- Source sequence(s)
-
AL034399, AL109946
- UniProtKB/TrEMBL
-
Q6GX22
- Conserved Domains (7) summary
-
- smart00502
Location:219 → 344
- BBC; B-Box C-terminal domain
- cd00063
Location:381 → 481
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- cd13739
Location:486 → 655
- SPRY_PRY_TRIM1; PRY/SPRY domain of tripartite motif-binding protein 1 (TRIM1) or MID2
- cd16754
Location:10 → 62
- RING-HC_MID2; RING finger, HC subclass, found in midline-2 (MID2) and similar proteins
- cd19823
Location:173 → 212
- Bbox2_MID2_C-I; B-box-type 2 zinc finger found in midline-2 (MID2) and similar proteins
- cd19837
Location:115 → 167
- Bbox1_MID2_C-I; B-box-type 1 zinc finger found in midline-2 (MID2) and similar proteins
- pfam18568
Location:323 → 374
- COS; TRIM C-terminal subgroup One Signature domain
-
NM_012216.4 → NP_036348.2 probable E3 ubiquitin-protein ligase MID2 isoform 1
See identical proteins and their annotated locations for NP_036348.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1).
- Source sequence(s)
-
AL034399, DN997921, Y18880
- Consensus CDS
-
CCDS14532.2
- UniProtKB/Swiss-Prot
- A6NEL8, A6PVI5, Q5JYF5, Q8WWK1, Q9UJR9, Q9UJV3
- Related
- ENSP00000262843.6, ENST00000262843.11
- Conserved Domains (7) summary
-
- smart00502
Location:239 → 364
- BBC; B-Box C-terminal domain
- cd00063
Location:401 → 531
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- cd13739
Location:536 → 705
- SPRY_PRY_TRIM1; PRY/SPRY domain of tripartite motif-binding protein 1 (TRIM1) or MID2
- cd16754
Location:30 → 82
- RING-HC_MID2; RING finger, HC subclass, found in midline-2 (MID2) and similar proteins
- cd19823
Location:193 → 232
- Bbox2_MID2_C-I; B-box-type 2 zinc finger found in midline-2 (MID2) and similar proteins
- cd19837
Location:135 → 187
- Bbox1_MID2_C-I; B-box-type 1 zinc finger found in midline-2 (MID2) and similar proteins
- pfam18568
Location:343 → 394
- COS; TRIM C-terminal subgroup One Signature domain
-
NM_052817.3 → NP_438112.2 probable E3 ubiquitin-protein ligase MID2 isoform 2
See identical proteins and their annotated locations for NP_438112.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) uses an alternate in-frame splice site in the coding region, compared to variant 1. It encodes isoform 2 which is shorter than isoform 1.
- Source sequence(s)
-
AF196481, AL034399, DN997921
- Consensus CDS
-
CCDS14533.2
- UniProtKB/Swiss-Prot
-
Q9UJV3
- Related
- ENSP00000413976.2, ENST00000443968.2
- Conserved Domains (7) summary
-
- smart00502
Location:239 → 364
- BBC; B-Box C-terminal domain
- cd00063
Location:401 → 501
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- cd13739
Location:506 → 675
- SPRY_PRY_TRIM1; PRY/SPRY domain of tripartite motif-binding protein 1 (TRIM1) or MID2
- cd16754
Location:30 → 82
- RING-HC_MID2; RING finger, HC subclass, found in midline-2 (MID2) and similar proteins
- cd19823
Location:193 → 232
- Bbox2_MID2_C-I; B-box-type 2 zinc finger found in midline-2 (MID2) and similar proteins
- cd19837
Location:135 → 187
- Bbox1_MID2_C-I; B-box-type 1 zinc finger found in midline-2 (MID2) and similar proteins
- pfam18568
Location:343 → 394
- COS; TRIM C-terminal subgroup One Signature domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000023.11 Reference GRCh38.p14 Primary Assembly
- Range
-
107825735..107931637
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate T2T-CHM13v2.0
Genomic
-
NC_060947.1 Alternate T2T-CHM13v2.0
- Range
-
106262471..106368728
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)