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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001242844.2 → NP_001229773.1 E3 ubiquitin-protein ligase RNF146 isoform a
See identical proteins and their annotated locations for NP_001229773.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the shorter isoform (a). Variants 1-7 encode the same isoform (a).
- Source sequence(s)
-
AJ420549, DA639989
- Consensus CDS
-
CCDS5136.1
- UniProtKB/Swiss-Prot
-
Q9NTX7
- Conserved Domains (2) summary
-
- smart00678
Location:103 → 175
- WWE; Domain in Deltex and TRIP12 homologues. Possibly involved in regulation of ubiquitin-mediated proteolysis
- cd16546
Location:35 → 74
- RING-HC_RNF146; RING finger, HC subclass, found in RING finger protein 146 (RNF146) and similar proteins
-
NM_001242845.2 → NP_001229774.1 E3 ubiquitin-protein ligase RNF146 isoform a
See identical proteins and their annotated locations for NP_001229774.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) differs in the 5' UTR, compared to variant 1. Variants 1-7 encode the same isoform (a).
- Source sequence(s)
-
AJ420549, BI669435, DA707096, DB267873
- Consensus CDS
-
CCDS5136.1
- UniProtKB/Swiss-Prot
-
Q9NTX7
- Conserved Domains (2) summary
-
- smart00678
Location:103 → 175
- WWE; Domain in Deltex and TRIP12 homologues. Possibly involved in regulation of ubiquitin-mediated proteolysis
- cd16546
Location:35 → 74
- RING-HC_RNF146; RING finger, HC subclass, found in RING finger protein 146 (RNF146) and similar proteins
-
NM_001242846.2 → NP_001229775.1 E3 ubiquitin-protein ligase RNF146 isoform a
See identical proteins and their annotated locations for NP_001229775.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) differs in the 5' UTR, compared to variant 1. Variants 1-7 encode the same isoform (a).
- Source sequence(s)
-
AJ420549, DA043259, DB267873
- Consensus CDS
-
CCDS5136.1
- UniProtKB/Swiss-Prot
-
Q9NTX7
- Related
- ENSP00000477168.1, ENST00000608991.5
- Conserved Domains (2) summary
-
- smart00678
Location:103 → 175
- WWE; Domain in Deltex and TRIP12 homologues. Possibly involved in regulation of ubiquitin-mediated proteolysis
- cd16546
Location:35 → 74
- RING-HC_RNF146; RING finger, HC subclass, found in RING finger protein 146 (RNF146) and similar proteins
-
NM_001242847.2 → NP_001229776.1 E3 ubiquitin-protein ligase RNF146 isoform a
See identical proteins and their annotated locations for NP_001229776.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (5) differs in the 5' UTR, compared to variant 1. Variants 1-7 encode the same isoform (a).
- Source sequence(s)
-
AJ420549, DA707096
- UniProtKB/Swiss-Prot
-
Q9NTX7
- Conserved Domains (2) summary
-
- smart00678
Location:103 → 175
- WWE; Domain in Deltex and TRIP12 homologues. Possibly involved in regulation of ubiquitin-mediated proteolysis
- cd16546
Location:35 → 74
- RING-HC_RNF146; RING finger, HC subclass, found in RING finger protein 146 (RNF146) and similar proteins
-
NM_001242848.2 → NP_001229777.1 E3 ubiquitin-protein ligase RNF146 isoform a
See identical proteins and their annotated locations for NP_001229777.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (6) differs in the 5' UTR, compared to variant 1. Variants 1-7 encode the same isoform (a).
- Source sequence(s)
-
AJ420549, DA145911
- UniProtKB/Swiss-Prot
-
Q9NTX7
- Conserved Domains (2) summary
-
- smart00678
Location:103 → 175
- WWE; Domain in Deltex and TRIP12 homologues. Possibly involved in regulation of ubiquitin-mediated proteolysis
- cd16546
Location:35 → 74
- RING-HC_RNF146; RING finger, HC subclass, found in RING finger protein 146 (RNF146) and similar proteins
-
NM_001242849.2 → NP_001229778.1 E3 ubiquitin-protein ligase RNF146 isoform b
See identical proteins and their annotated locations for NP_001229778.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (8) lacks two alternate internal exons, which results in the use of an upstream start codon, compared to variant 1. The encoded isoform (b) has a longer N-terminus than isoform a. Variants 8-10 encode the same isoform (b).
- Source sequence(s)
-
AI929027, AJ420549, CN388414
- Consensus CDS
-
CCDS56449.1
- UniProtKB/Swiss-Prot
- E1P572, Q6FIB2, Q7L8H4, Q96K03, Q96T06, Q9NTX6, Q9NTX7
- Related
- ENSP00000476814.1, ENST00000610153.1
- Conserved Domains (2) summary
-
- smart00678
Location:104 → 176
- WWE; Domain in Deltex and TRIP12 homologues. Possibly involved in regulation of ubiquitin-mediated proteolysis
- cd16546
Location:36 → 75
- RING-HC_RNF146; RING finger, HC subclass, found in RING finger protein 146 (RNF146) and similar proteins
-
NM_001242850.2 → NP_001229779.1 E3 ubiquitin-protein ligase RNF146 isoform b
See identical proteins and their annotated locations for NP_001229779.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (9) lacks two alternate internal exons, which results in the use of an upstream start codon, compared to variant 1. The encoded isoform (b) has a longer N-terminus than isoform a. Variants 8-10 encode the same isoform (b).
- Source sequence(s)
-
AJ420549, AK027558
- Consensus CDS
-
CCDS56449.1
- UniProtKB/Swiss-Prot
- E1P572, Q6FIB2, Q7L8H4, Q96K03, Q96T06, Q9NTX6, Q9NTX7
- Related
- ENSP00000357297.1, ENST00000368314.6
- Conserved Domains (2) summary
-
- smart00678
Location:104 → 176
- WWE; Domain in Deltex and TRIP12 homologues. Possibly involved in regulation of ubiquitin-mediated proteolysis
- cd16546
Location:36 → 75
- RING-HC_RNF146; RING finger, HC subclass, found in RING finger protein 146 (RNF146) and similar proteins
-
NM_001242851.1 → NP_001229780.1 E3 ubiquitin-protein ligase RNF146 isoform b
See identical proteins and their annotated locations for NP_001229780.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (10) contains an alternate 5' terminal exon and lacks two alternate internal exons, which results in the use of an upstream start codon, compared to variant 1. The encoded isoform (b) has a longer N-terminus than isoform a. Variants 8-10 encode the same isoform (b).
- Source sequence(s)
-
AJ420549, BG708628, BI771613
- Consensus CDS
-
CCDS56449.1
- UniProtKB/Swiss-Prot
- E1P572, Q6FIB2, Q7L8H4, Q96K03, Q96T06, Q9NTX6, Q9NTX7
- Conserved Domains (2) summary
-
- smart00678
Location:104 → 176
- WWE; Domain in Deltex and TRIP12 homologues. Possibly involved in regulation of ubiquitin-mediated proteolysis
- cd16546
Location:36 → 75
- RING-HC_RNF146; RING finger, HC subclass, found in RING finger protein 146 (RNF146) and similar proteins
-
NM_001242852.2 → NP_001229781.1 E3 ubiquitin-protein ligase RNF146 isoform a
See identical proteins and their annotated locations for NP_001229781.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (7) differs in the 5' UTR, compared to variant 1. Variants 1-4 and variant 7 encode the same isoform.
- Source sequence(s)
-
AI929027, AJ420549, AL136829, DA826982
- Consensus CDS
-
CCDS5136.1
- UniProtKB/Swiss-Prot
-
Q9NTX7
- Conserved Domains (2) summary
-
- smart00678
Location:103 → 175
- WWE; Domain in Deltex and TRIP12 homologues. Possibly involved in regulation of ubiquitin-mediated proteolysis
- cd16546
Location:35 → 74
- RING-HC_RNF146; RING finger, HC subclass, found in RING finger protein 146 (RNF146) and similar proteins
-
NM_030963.4 → NP_112225.2 E3 ubiquitin-protein ligase RNF146 isoform a
See identical proteins and their annotated locations for NP_112225.2
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR, compared to variant 1. Variants 1-7 encode the same isoform (a).
- Source sequence(s)
-
AJ420549, AL136829, DB267873
- Consensus CDS
-
CCDS5136.1
- UniProtKB/Swiss-Prot
-
Q9NTX7
- Conserved Domains (2) summary
-
- smart00678
Location:103 → 175
- WWE; Domain in Deltex and TRIP12 homologues. Possibly involved in regulation of ubiquitin-mediated proteolysis
- cd16546
Location:35 → 74
- RING-HC_RNF146; RING finger, HC subclass, found in RING finger protein 146 (RNF146) and similar proteins
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000006.12 Reference GRCh38.p14 Primary Assembly
- Range
-
127266682..127288562
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_017011336.3 → XP_016866825.1 E3 ubiquitin-protein ligase RNF146 isoform X1
- UniProtKB/Swiss-Prot
- E1P572, Q6FIB2, Q7L8H4, Q96K03, Q96T06, Q9NTX6, Q9NTX7
- Conserved Domains (2) summary
-
- smart00678
Location:104 → 176
- WWE; Domain in Deltex and TRIP12 homologues. Possibly involved in regulation of ubiquitin-mediated proteolysis
- cd16546
Location:36 → 75
- RING-HC_RNF146; RING finger, HC subclass, found in RING finger protein 146 (RNF146) and similar proteins
-
XM_047419389.1 → XP_047275345.1 E3 ubiquitin-protein ligase RNF146 isoform X2
-
XM_047419386.1 → XP_047275342.1 E3 ubiquitin-protein ligase RNF146 isoform X2
-
XM_047419388.1 → XP_047275344.1 E3 ubiquitin-protein ligase RNF146 isoform X2
-
XM_011536161.4 → XP_011534463.1 E3 ubiquitin-protein ligase RNF146 isoform X2
See identical proteins and their annotated locations for XP_011534463.1
- UniProtKB/Swiss-Prot
-
Q9NTX7
- Conserved Domains (2) summary
-
- smart00678
Location:103 → 175
- WWE; Domain in Deltex and TRIP12 homologues. Possibly involved in regulation of ubiquitin-mediated proteolysis
- cd16546
Location:35 → 74
- RING-HC_RNF146; RING finger, HC subclass, found in RING finger protein 146 (RNF146) and similar proteins
-
XM_011536163.4 → XP_011534465.1 E3 ubiquitin-protein ligase RNF146 isoform X2
See identical proteins and their annotated locations for XP_011534465.1
- UniProtKB/Swiss-Prot
-
Q9NTX7
- Conserved Domains (2) summary
-
- smart00678
Location:103 → 175
- WWE; Domain in Deltex and TRIP12 homologues. Possibly involved in regulation of ubiquitin-mediated proteolysis
- cd16546
Location:35 → 74
- RING-HC_RNF146; RING finger, HC subclass, found in RING finger protein 146 (RNF146) and similar proteins
-
XM_011536164.4 → XP_011534466.1 E3 ubiquitin-protein ligase RNF146 isoform X2
See identical proteins and their annotated locations for XP_011534466.1
- UniProtKB/Swiss-Prot
-
Q9NTX7
- Conserved Domains (2) summary
-
- smart00678
Location:103 → 175
- WWE; Domain in Deltex and TRIP12 homologues. Possibly involved in regulation of ubiquitin-mediated proteolysis
- cd16546
Location:35 → 74
- RING-HC_RNF146; RING finger, HC subclass, found in RING finger protein 146 (RNF146) and similar proteins
-
XM_047419387.1 → XP_047275343.1 E3 ubiquitin-protein ligase RNF146 isoform X2
Alternate T2T-CHM13v2.0
Genomic
-
NC_060930.1 Alternate T2T-CHM13v2.0
- Range
-
128455637..128477520
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054356499.1 → XP_054212474.1 E3 ubiquitin-protein ligase RNF146 isoform X1
- UniProtKB/Swiss-Prot
- E1P572, Q6FIB2, Q7L8H4, Q96K03, Q96T06, Q9NTX6, Q9NTX7
-
XM_054356503.1 → XP_054212478.1 E3 ubiquitin-protein ligase RNF146 isoform X2
-
XM_054356500.1 → XP_054212475.1 E3 ubiquitin-protein ligase RNF146 isoform X2
-
XM_054356502.1 → XP_054212477.1 E3 ubiquitin-protein ligase RNF146 isoform X2
-
XM_054356504.1 → XP_054212479.1 E3 ubiquitin-protein ligase RNF146 isoform X2
-
XM_054356505.1 → XP_054212480.1 E3 ubiquitin-protein ligase RNF146 isoform X2
-
XM_054356506.1 → XP_054212481.1 E3 ubiquitin-protein ligase RNF146 isoform X2
-
XM_054356501.1 → XP_054212476.1 E3 ubiquitin-protein ligase RNF146 isoform X2