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    PBR1 putative oxidoreductase [ Saccharomyces cerevisiae S288C ]

    Gene ID: 855540, updated on 18-Sep-2024

    Summary

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    Official Symbol
    PBR1
    Official Full Name
    putative oxidoreductase
    Primary source
    SGD:S000005125
    Locus tag
    YNL181W
    See related
    AllianceGenome:SGD:S000005125; FungiDB:YNL181W; VEuPathDB:YNL181W
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Predicted to enable oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor. Located in endoplasmic reticulum and nuclear envelope. Orthologous to human RDH14 (retinol dehydrogenase 14). [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    See PBR1 in Genome Data Viewer
    Location:
    chromosome: XIV
    Exon count:
    1
    Sequence:
    Chromosome: XIV; NC_001146.8 (298335..299558)

    Chromosome XIV - NC_001146.8Genomic Context describing neighboring genes Neighboring gene serine/threonine protein kinase NPR1 Neighboring gene chromatin-binding/pre-rRNA-processing protein IPI3 Neighboring gene Rho family GTPase RHO5 Neighboring gene ribosomal 40S subunit protein S3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001146.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Large-scale protein structure modeling of the Saccharomyces cerevisiae genome. Sánchez R, et al. Proc Natl Acad Sci U S A, 1998 Nov 10. PMID 9811845, Free PMC Article
    2. Functional analysis with a barcoder yeast gene overexpression system. Douglas AC, et al. G3 (Bethesda), 2012 Oct. PMID 23050238, Free PMC Article
    3. Assigning function to yeast proteins by integration of technologies. Hazbun TR, et al. Mol Cell, 2003 Dec. PMID 14690591
    4. Recruitment of Cytosolic J-Proteins by TOM Receptors Promotes Mitochondrial Protein Biogenesis. Opaliński Ł, et al. Cell Rep, 2018 Nov 20. PMID 30463002, Free PMC Article
    5. Functional profiling of the Saccharomyces cerevisiae genome. Giaever G, et al. Nature, 2002 Jul 25. PMID 12140549

    See all (26) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables oxidoreductase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in endoplasmic reticulum HDA PubMed 
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in nuclear envelope HDA PubMed 

    General protein information

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    Preferred Names
    putative oxidoreductase
    NP_014218.2
    • Putative oxidoreductase; required for cell viability

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001146.8 Reference assembly

      Range
      298335..299558
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001183019.2 → NP_014218.2  TPA: putative oxidoreductase [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_014218.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6W105, P53878
      UniProtKB/TrEMBL
      C7GTF4, G2WLS8, N1NWG1
      Conserved Domains (1) summary
      cd05327
      Location:53 → 367
      retinol-DH_like_SDR_c_like; retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P53878.2

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