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    gpi2 putative pig-C family GPI synthesis protein [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2539262, updated on 17-May-2024

    Summary

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    Gene symbol
    gpi2
    Gene description
    putative pig-C family GPI synthesis protein
    Primary source
    PomBase:SPCC550.04c
    Locus tag
    SPCC550.04c
    See related
    FungiDB:SPCC550.04c; VEuPathDB:SPCC550.04c
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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    Genomic context

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    See gpi2 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    4
    Sequence:
    Chromosome: III; NC_003421.2 (1191599..1193243, complement)

    Chromosome III - NC_003421.2Genomic Context describing neighboring genes Neighboring gene putative Ski complex RNA helicase Ski2 Neighboring gene RNA-binding protein Cwf5 Neighboring gene miscRNA Neighboring gene Smc5-6 complex non-SMC subunit 1 Neighboring gene putative protein Hsp10 Neighboring gene putative acetamidase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003421.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A Proteome-wide Fission Yeast Interactome Reveals Network Evolution Principles from Yeasts to Human. Vo TV, et al. Cell, 2016 Jan 14. PMID 26771498, Free PMC Article
    2. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
    3. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360
    4. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    contributes_to phosphatidylinositol N-acetylglucosaminyltransferase activity ISM
    Inferred from Sequence Model
    more info
    		  
    Process Evidence Code Pubs
    involved_in GPI anchor biosynthetic process ISO
    Inferred from Sequence Orthology
    more info
    		  
    Component Evidence Code Pubs
    is_active_in endoplasmic reticulum HDA PubMed 
    part_of glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    putative pig-C family GPI synthesis protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003421.2 Reference assembly

      Range
      1191599..1193243 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001023087.2 → NP_588096.1  putative pig-C family GPI synthesis protein [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_588096.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      O59802
      Conserved Domains (1) summary
      pfam06432
      Location:38 → 313
      GPI2; Phosphatidylinositol N-acetylglucosaminyltransferase
    Nucleotide Protein
    Heading Accession and Version

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