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    ZK1127.3 Uncharacterized protein [ Caenorhabditis elegans ]

    Gene ID: 174154, updated on 12-Jun-2024

    Summary

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    Gene symbol
    ZK1127.3
    Gene description
    Uncharacterized protein
    Locus tag
    CELE_ZK1127.3
    See related
    AllianceGenome:WB:WBGene00022850
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be involved in histone acetylation and regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Predicted to be part of NuA4 histone acetyltransferase complex. Orthologous to human MRGBP (MRG domain binding protein). [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    See ZK1127.3 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    4
    Sequence:
    Chromosome: II; NC_003280.10 (7055287..7056191)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Phage tail protein Neighboring gene Protein BCCIP homolog Neighboring gene Putative cystathionine gamma-lyase 2 Neighboring gene fatty Acid CoA Synthetase family Neighboring gene MutS protein homolog him-14 Neighboring gene Nanos-type domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Empirically controlled mapping of the Caenorhabditis elegans protein-protein interactome network. Simonis N, et al. Nat Methods, 2009 Jan. PMID 19123269, Free PMC Article
    2. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916
    4. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in regulation of transcription by RNA polymerase II IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    part_of H4/H2A histone acetyltransferase complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    part_of NuA4 histone acetyltransferase complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Uncharacterized protein
    NP_495448.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      7055287..7056191
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_063047.4 → NP_495448.1  Uncharacterized protein CELE_ZK1127.3 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_495448.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q23403
      Conserved Domains (1) summary
      pfam07904
      Location:42 → 161
      Eaf7; Chromatin modification-related protein EAF7
    Nucleotide Protein
    Heading Accession and Version

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