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    pals-40 Helo_like_N domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 190773, updated on 18-Sep-2024

    Summary

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    Official Symbol
    pals-40
    Official Full Name
    Helo_like_N domain-containing protein
    Primary source
    WormBase:WBGene00022344
    Locus tag
    CELE_Y82E9BR.11
    See related
    AllianceGenome:WB:WBGene00022344
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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    Genomic context

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    See pals-40 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    3
    Sequence:
    Chromosome: III; NC_003281.10 (1376945..1378003, complement)

    Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene Type I toxin-antitoxin system SymE family toxin Neighboring gene Ovule protein Neighboring gene Protein containing ALS2cr12 (ALS2CR12) signature Neighboring gene Hydrogenase iron-sulfur subunit

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003281.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Multiple pals gene modules control a balance between immunity and development in Caenorhabditis elegans. Lažetić V, et al. PLoS Pathog, 2023 Jul. PMID 37463170, Free PMC Article
    2. Mitochondrial dysfunction induces RNA interference in C. elegans through a pathway homologous to the mammalian RIG-I antiviral response. Mao K, et al. PLoS Biol, 2020 Dec. PMID 33264285, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    Helo_like_N domain-containing protein
    NP_497398.2
    • Partially confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003281.10 Reference assembly

      Range
      1376945..1378003 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_064997.2 → NP_497398.2  Helo_like_N domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_497398.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9BKS8
      Conserved Domains (1) summary
      PRK08639
      Location:17 → 71
      PRK08639; threonine dehydratase; Validated
    Nucleotide Protein
    Heading Accession and Version

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