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    pei-2 BTB domain-containing protein;SAM domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 178603, updated on 18-Sep-2024

    Summary

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    Official Symbol
    pei-2
    Official Full Name
    BTB domain-containing protein;SAM domain-containing protein
    Primary source
    WormBase:WBGene00019972
    Locus tag
    CELE_R09A1.2
    See related
    AllianceGenome:WB:WBGene00019972
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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    Genomic context

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    See pei-2 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    9
    Sequence:
    Chromosome: V; NC_003283.11 (1018336..1023467, complement)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene VASP tetramerization domain-containing protein;VASP_tetra domain-containing protein;WH1 domain-containing protein Neighboring gene Drf_GBD domain-containing protein Neighboring gene Piwi domain-containing protein;Piwi-like protein ergo-1 Neighboring gene UPF0496 protein Neighboring gene FMRF-Like Peptide

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Membrane-associated cytoplasmic granules carrying the Argonaute protein WAGO-3 enable paternal epigenetic inheritance in Caenorhabditis elegans. Schreier J, et al. Nat Cell Biol, 2022 Feb. PMID 35132225, Free PMC Article
    2. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    BTB domain-containing protein;SAM domain-containing protein
    NP_001300167.1
    • Confirmed by transcript evidence
    NP_001300168.1
    • Confirmed by transcript evidence
    NP_001300169.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      1018336..1023467 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001313238.2 → NP_001300167.1  BTB domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0K3AS98
      Conserved Domains (1) summary
      cd18186
      Location:48 → 126
      BTB_POZ_ZBTB_KLHL-like; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing (ZBTB) proteins, Kelch-like (KLHL) proteins, and similar proteins

    2. NM_001313239.3 → NP_001300168.1  BTB domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0K3AVT4

    3. NM_001313240.3 → NP_001300169.1  SAM domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0K3AY27

    RNA

    1. NR_132494.1 RNA Sequence

      Status: REVIEWED

    2. NR_132495.1 RNA Sequence

      Status: REVIEWED

    Nucleotide Protein
    Heading Accession and Version

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